Protein Alignment Arp3 and Actl6b

DIOPT Version :9

• Sequence 1: NP_001261559.1
• Gene: Arp3 / 38898
• FlyBaseID: FBgn0262716
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: XP_006249182.1
• Gene: Actl6b / 288563
• RGDID: 1307763
• Length: 444
• Species: Rattus norvegicus
• Alignment Length: 465
• Identity: 117/465 - (25%)
• Similarity: 196/465 - (42%)
• Gaps: 109/465 - (23%)

  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIP---------------------SAIAIKESARVG------ 44
            |.|.|:|:...:.|:||...|:..:|                     ..:|.:|...:.
  Rat    13 ALVFDIGSFSVRAGYAGEDCPKVSLPVPSPYPRGSDTLCQADFPTTVGLLAAEEGGGLELEGEKE 77

  Fly    45 --------DTNTRRITKGIEDLDFFIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYL 101
                    |||...:.:                .|..:..|:::|::|||:.....|:....|::
  Rat    78 KKGKIFHIDTNALHVPR----------------DGAEVMSPLKNGMIEDWECFRAILDHTYSKHV 126

  Fly   102 RAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGI 166
            ::||..|..|::|.|.||...||...|:|||.:|:|..::...|||...|:..|        ||:
  Rat   127 KSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRS--------TGL 183

  Fly   167 VVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAI---- 227
            |:|||...|..|||.:|||:...|...|:||..|:...:.|.:|..:.|.|...:...:.:
  Rat   184 VLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGA 248

  Fly   228 ------KEK--------HCYICPDIAKEF---------AKYDTEPGKWIRNFSGVNTVTKAPFNV 269
                  |||        |.|:|.::.::|         :.||.:..   .....|:......:|.
  Rat   249 PPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVA---AQMPTVHYEMPNGYNT 310

  Fly   270 DVGYERFLGPEIFFHPEFSN-----PDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFK 329
            |.|.||...||..|.|  ||     .:..:.:..:|...|..|.||:|..||.:::::||:|:.:
  Rat   311 DYGAERLRIPEGLFDP--SNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQ 373

  Fly   330 DFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVC 394
            .|..||.|::.:.....:|:....|...::             ::::.|.|||:|||...|.|:.
  Rat   374 GFTDRLNRELSQKTPPSMRLKLIASNSTME-------------RKFSPWIGGSILASLGTFQQMW 425

  Fly   395 HTKAAYEEYG 404
            .:|..|||.|
  Rat   426 ISKQEYEEGG 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp3	NP_001261559.1	PTZ00280	2..417	CDD:240343	117/465 (25%)
Actl6b	XP_006249182.1	Actin	11..444	CDD:394979	117/465 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5277
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910