DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actbl2

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_780706.1 Gene:Actbl2 / 238880 MGIID:2444552 Length:376 Species:Mus musculus


Alignment Length:421 Identity:148/421 - (35%)
Similarity:213/421 - (50%) Gaps:61/421 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDA 69
            |.|.|:|.|:|..|.||.|:..|:.:.||        .||....:.:..|:...|.::||||...
Mouse     6 LTALVVDNGSGMCKAGFGGDDAPRAVFPS--------MVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

  Fly    70 TG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFET 133
            .| .::|||:.||:|.:||.||:......:..||..|::|..||||.|||...|||...:||||.
Mouse    63 RGILTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQIMFEA 127

  Fly   134 FNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGR 198
            ||.|.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.:|||
Mouse   128 FNTPAMYVAIQAVLSLYAS-------GRT-TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184

  Fly   199 NITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWI 253
            ::|.::..:|.||..........|..:.:|||.||:..|..:|..          .|:...|:.|
Mouse   185 DLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSYELPDGQVI 249

  Fly   254 RNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNN 318
                            .:|.|||..||..|.|.|...: :..:.|...|.|..|.:|:|:.|:.|
Mouse   250 ----------------TIGNERFRCPEAIFQPSFLGIE-SRGIHETTFNSIMKCDVDIRKDLFAN 297

  Fly   319 IVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSM 383
            .||||||||:.....|:|::|.                .:.|..:.:::|....::|:||.|||:
Mouse   298 TVLSGGSTMYPGIADRMQKEIV----------------TLAPSTMKIKIIAPPERKYSVWIGGSI 346

  Fly   384 LASTPEFYQVCHTKAAYEEYGPSICRHNPVF 414
            |||...|.|:..:|..|:|.||.|. |...|
Mouse   347 LASLSTFQQMWISKQEYDEAGPPIV-HRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 145/413 (35%)
Actbl2NP_780706.1 ASKHA_NBD_actin 7..371 CDD:466823 144/412 (35%)

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