DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actr1b

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001405064.1 Gene:Actr1b / 226977 MGIID:1917446 Length:381 Species:Mus musculus


Alignment Length:240 Identity:51/240 - (21%)
Similarity:90/240 - (37%) Gaps:75/240 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   744 KESEQFLWAGSEMDRVRDVTKSLNKAKIWAEAVSDCLSKVEGEVNDDSMKVHLEFIDELLRVNPV 808
            :::::||.|..:.:.||      .|||:  ..|.|.......:::.|||                
Mouse    33 EKTDEFLLARFKGNGVR------YKAKL--IGVDDVPEARGDKMSQDSM---------------- 73

  Fly   809 PCFNSGYLKLKDYAEEAR---KLSEKIDSALS-SSPTITQLELLHSEVSRSPISLKKHEILSKKI 869
                   :|||..|..||   |..:::...:| |..|:|.        .::..::.:|.:.....
Mouse    74 -------MKLKGKAVAARSQGKHKQRVWVNISLSGITVTD--------EKTGAAILEHAVNKISF 123

  Fly   870 SSAKMLAKRAKRYL---------------TDAKPPGIEMDALFKLNSEMLELHVQLPETEGILDL 919
            .:..:...||..|:               ..|:|..|::..||:|...|     :..|.||    
Mouse   124 IARDVTDSRAFGYVCGAEGQHQFFAIKTAQQAEPLVIDLKDLFQLIFNM-----KKKEVEG---- 179

  Fly   920 VKKSESARDKSNKVL-TGSLSLENVEELLHEFDSFS--INVPELN 961
                 |.:|::|||: .||....|..:.:.:.|.|.  ...|:||
Mouse   180 -----SKKDENNKVVENGSEGSHNDRKGVEQLDLFGDMSTPPDLN 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822
Actr1bNP_001405064.1 ASKHA_NBD_Arp1 9..380 CDD:466820 51/240 (21%)
Blue background indicates that the domain is not in the aligned region.

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