DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actl7b

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_079547.2 Gene:Actl7b / 11471 MGIID:1343053 Length:418 Species:Mus musculus


Alignment Length:414 Identity:118/414 - (28%)
Similarity:193/414 - (46%) Gaps:66/414 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFD 68
            ::.|.|||:|:.|.|.|:||...|.:.|.|.:..:.:....|.       |....:.::|.|..:
Mouse    50 KIKALVIDLGSQYCKCGYAGEPRPTYFISSTVGKRSAEMAADA-------GDNFKETYVGHELLN 107

  Fly    69 ATGYSIKY--PVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMF 131
            ... |:|.  |::||:|.|||.::...|......::..||:|..|:::|||:...|||..||::|
Mouse   108 MEA-SLKLVNPLKHGVVVDWDCIQNIWEYIFHTAMKIMPEEHAVLVSDPPLSPTSNREKYAELLF 171

  Fly   132 ETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIA 196
            |||.:|.:::..||:|:: .|:...|       |:||:||.||:||:|::||.::......:..|
Mouse   172 ETFGIPAMHVTSQALLSI-YSYGKTS-------GLVVESGHGVSHVVPISEGDLLPGLPSRVDYA 228

  Fly   197 GRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCY--ICPD------IAKEFAKYDTEPGKWI 253
            |.::|:::..||.|..... .:..|...:.||:|.||  :.|:      :.:....|:...||.|
Mouse   229 GCDLTNYLMQLLNEAGHKF-SDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELHVDYELPDGKII 292

  Fly   254 RNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIP-LSEIVDNVIQNCP-IDVRRPLY 316
                            .:|.|||...|:.|.|  |....|.| |.|:....:..|. ...:..:.
Mouse   293 ----------------TIGQERFRCSEMLFKP--SLVGCTQPGLPELTATCLARCQGTGFKEEMA 339

  Fly   317 NNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQR-YAVWFG 380
            .|::|.||.||...|..|.||::....                  |.|...:....:| .:||.|
Mouse   340 ANVLLCGGCTMLDGFPERFQRELSLLC------------------PGDSPTVAAAPERKTSVWTG 386

  Fly   381 GSMLASTPEFYQVCHTKAAYEEYG 404
            ||:|||...|.|:..:|..:||.|
Mouse   387 GSILASLQAFQQLWVSKEEFEERG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 118/414 (29%)
Actl7bNP_079547.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
ACTIN 52..418 CDD:214592 118/412 (29%)
NBD_sugar-kinase_HSP70_actin 53..418 CDD:302596 118/411 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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