DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ACTR1B

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_005726.1 Gene:ACTR1B / 10120 HGNCID:168 Length:376 Species:Homo sapiens


Alignment Length:408 Identity:154/408 - (37%)
Similarity:221/408 - (54%) Gaps:46/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATG-Y 72
            |||.|:|..|.||||::.|::..|:        .||.....|:..|..:.|.|||.:|.:..| .
Human    13 VIDNGSGVIKAGFAGDQIPKYCFPN--------YVGRPKHMRVMAGALEGDLFIGPKAEEHRGLL 69

  Fly    73 SIKYPVRHGLVEDWDLMERFLEQCVFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNV 136
            :|:||:.||:|.||:.|||..:....| .|:...|:|..||||.|||..:|||..||:.||||||
Human    70 TIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNV 134

  Fly   137 PGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNIT 201
            |.|:|::||||:|.|:       .|| ||:|:||||||||.:|:.||:.:...|..:.||||:::
Human   135 PALFISMQAVLSLYAT-------GRT-TGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVS 191

  Fly   202 SFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVTKAP 266
            .:::.|||:..|........|..:.|||:.||:..:..|:.| .:||.         |.......
Human   192 RYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEA-LETEK---------VQYTLPDG 246

  Fly   267 FNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDF 331
            ..:|||..||..||:.|.|:... |.:..|.|:|...|....:|:||.|:.|||||||||:||.|
Human   247 STLDVGPARFRAPELLFQPDLVG-DESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGF 310

  Fly   332 GRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHT 396
            |.||..::|                ::.||.|.:::.....:.|:.|.|||:|||...|.::..:
Human   311 GDRLLSEVK----------------KLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVS 359

  Fly   397 KAAYEEYGPSICRHNPVF 414
            |..|||.| |...|...|
Human   360 KKEYEEDG-SRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 154/408 (38%)
ACTR1BNP_005726.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 153/406 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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