DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ACTR2

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001005386.1 Gene:ACTR2 / 10097 HGNCID:169 Length:399 Species:Homo sapiens


Alignment Length:422 Identity:141/422 - (33%)
Similarity:213/422 - (50%) Gaps:70/422 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIA---IKESARVGDTNTRRITKGIEDLDFFIGDEAFDAT 70
            |.|.|||:.|.|:||:..|:.|.|:.:.   |:.:.:||:...:...|    :|..:||||.:..
Human    10 VCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKNNKK----MDLMVGDEASELR 70

  Fly    71 G-YSIKYPVRHGLVEDWDLMERFLEQCVF--KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFE 132
            . ..:.||:.:|:|.:||.| :.|....|  :.|..:..:...||||||:|..:|||...|:|||
Human    71 SMLEVNYPMENGIVRNWDDM-KHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFE 134

  Fly   133 TFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAG 197
            |:...|:|:|:||||.|.|        :..|||:||||||||||:.||.||:.:....:.:.|||
Human   135 TYQFSGVYVAIQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAG 191

  Fly   198 RNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKE----------FAKYDTEPGKW 252
            |:||.::..||..|..........||.:.||||.||:..:|.:|          ...|....|:.
Human   192 RDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRI 256

  Fly   253 IRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYN 317
            |:                ||.|||..||..|.|...|.: .:.::|::.|.||...||.|...|.
Human   257 IK----------------VGGERFEAPEALFQPHLINVE-GVGVAELLFNTIQAADIDTRSEFYK 304

  Fly   318 NIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRIS--ENLSEGRIK----PKPIDVQVITHHMQRYA 376
            :|||||||||:.....||:|::|:....|:...  |.||:.:|:    |:           :::.
Human   305 HIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPR-----------RKHM 358

  Fly   377 VWFGGSMLA----STPEFYQVCHTKAAYEEYG 404
            |:.||::||    ....|:.   |:..|:|.|
Human   359 VFLGGAVLADIMKDKDNFWM---TRQEYQEKG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 141/422 (33%)
ACTR2NP_001005386.1 ACTIN 6..393 CDD:214592 141/422 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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