DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nmo and KDX1

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_012761.1 Gene:KDX1 / 853696 SGDID:S000001644 Length:433 Species:Saccharomyces cerevisiae


Alignment Length:422 Identity:140/422 - (33%)
Similarity:214/422 - (50%) Gaps:70/422 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IGYGAFGVVWA--VTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HENV--LSALDI 105
            ||.|:..::.:  .|:..:...||::|:||.|.:.:|.||..||||:|...: |.|:  |...||
Yeast    29 IGRGSHSLICSSTYTESNEETHVAIRKIPNAFGNKLSCKRTLRELKLLRHLRGHPNIVWLFDTDI 93

  Fly   106 LQPPHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPG 170
            :..|: .....:|:..||::.||.:||.|.|.|...|.:.|:||||..|||:|||.:||.|:||.
Yeast    94 VFYPN-GALNGVYLYEELMECDLSQIIRSEQRLEDAHFQSFIYQILCALKYIHSANVLHCDLKPK 157

  Fly   171 NLLVNSNCVLKICDFGLARVEEPDQAKHMTQE------VVTQYYRAPEILMGARHYSSAVDVWSV 229
            ||||||:|.||||:|||:.....:   |...:      :.:.:|:|||||:..:..:.|||:||.
Yeast   158 NLLVNSDCQLKICNFGLSCSYSEN---HKVNDGFIKGYITSIWYKAPEILLNYQECTKAVDIWST 219

  Fly   230 GCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRH-ACEGARTHMLRRAPKP-PSFSVLY 292
            |||..|||||:.:|:.::.|..|..|.::||||..|.::. |.:....::.:....| .||.   
Yeast   220 GCILAELLGRKPMFEGKDYVDHLNHILQILGTPPEETLQEIASQKVYNYIFQFGNIPGRSFE--- 281

  Fly   293 TLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYH------SCMCKCCFTTSAGM 351
            ::...|..||:.||.:||.|||.|||:|.|||.||||.    .:|      ||            
Yeast   282 SILPGANPEALELLKKMLEFDPKKRITVEDALEHPYLS----MWHDIDEEFSC------------ 330

  Fly   352 RQYTADFEPSAGQPFDDLWERKLTSVQQVKE--EMHKFIAEQLQTGRVP--------------LC 400
             |.|..||      |:.:........:.:||  :..|.:.:...:|..|              :.
Yeast   331 -QKTFRFE------FEHIESMAELGNEVIKEVFDFRKVVRKHPISGDSPSSSLSLEDAIPQEVVQ 388

  Fly   401 INPQSAAFKSFASSTVAHPSELP----PSPHQ 428
            ::|......|: |...::.|:||    ..|:|
Yeast   389 VHPSRKVLPSY-SPEFSYVSQLPSLTTTQPYQ 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 133/399 (33%)
KDX1NP_012761.1 STKc_MPK1 22..355 CDD:173750 128/355 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341976
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.