DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and CDC28

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_009718.3 Gene:CDC28 / 852457 SGDID:S000000364 Length:298 Species:Saccharomyces cerevisiae


Alignment Length:302 Identity:111/302 - (36%)
Similarity:159/302 - (52%) Gaps:34/302 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IGYGAFGVVWAVTDPRDG---RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQ 107
            :|.|.:|||:...|.|.|   |.|||||:....:.........||:.:|...|.:|::...||: 
Yeast    14 VGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIV- 77

  Fly   108 PPHLDFFQEIYVITELLQSDLHKI---IVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKP 169
              |.| ..::|::.|.|..||.:.   |...|.|.||.:|.|:.|:.:|:.|.||.||||||:||
Yeast    78 --HSD-AHKLYLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKP 139

  Fly   170 GNLLVNSNCVLKICDFGLARV-EEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIF 233
            .|||:|.:..||:.||||||. ..|.:|  .|.|:||.:|||||:|:|.:.||:.||.||:||||
Yeast   140 QNLLINKDGNLKLGDFGLARAFGVPLRA--YTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIF 202

  Fly   234 GELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSF---------S 289
            .|:..|:.:|...:.:.|:..|..:||||.        |.....::......|||         .
Yeast   203 AEMCNRKPIFSGDSEIDQIFKIFRVLGTPN--------EAIWPDIVYLPDFKPSFPQWRRKDLSQ 259

  Fly   290 VLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDE 331
            |:.:|..    ..:.||.::|.:||..|||...|..|||..|
Yeast   260 VVPSLDP----RGIDLLDKLLAYDPINRISARRAAIHPYFQE 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 111/302 (37%)
CDC28NP_009718.3 STKc_CDK1_CdkB_like 8..295 CDD:270829 109/298 (37%)

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