DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and FUS3

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_009537.1 Gene:FUS3 / 852265 SGDID:S000000112 Length:353 Species:Saccharomyces cerevisiae


Alignment Length:312 Identity:131/312 - (41%)
Similarity:188/312 - (60%) Gaps:17/312 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVL 100
            :..|.|....:|.||:|||.:.|....|..||:||: ..|...:.:.|..||:|:|..|||||::
Yeast     9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENII 72

  Fly   101 SALDILQPPHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHR 165
            :..:|.:|...:.|.|:|:|.||:|:|||::| |.|.||.|||:.|:||.||.:|.||.:.::||
Yeast    73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136

  Fly   166 DIKPGNLLVNSNCVLKICDFGLARV---------EEPDQAKHMTQEVVTQYYRAPEILMGARHYS 221
            |:||.|||:||||.||:|||||||:         |...|...||:.|.|::|||||:::.:..||
Yeast   137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYS 201

  Fly   222 SAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGART-HMLRRAPKP 285
            .|:||||.|||..||..||.:|..::...||.||..::|||..::.....|..|. ..::..|..
Yeast   202 RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY 266

  Fly   286 PSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYH 337
            |: :.|..:......:.:.||.:||||||.|||:..:||.||||.    .||
Yeast   267 PA-APLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ----TYH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 131/309 (42%)
FUS3NP_009537.1 STKc_ERK1_2_like 7..353 CDD:270839 131/312 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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