Protein Alignment nmo and si:ch211-220i18.4

DIOPT Version :10

• Sequence 1: NP_001356976.1
• Gene: nmo / 38890
• FlyBaseID: FBgn0011817
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: XP_021325577.2
• Gene: si:ch211-220i18.4 / 798392
• ZFINID: ZDB-GENE-090312-151
• Length: 393
• Species: Danio rerio
• Alignment Length: 362
• Identity: 102/362 - (28%)
• Similarity: 147/362 - (40%)
• Gaps: 100/362 - (27%)

  Fly    46 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFR-ELKMLCFFKHENVLSALD--ILQ 107
            :|:|.|..||...|.|.||.||:|    |.:|.....:..: ||.:|.........:.|.  |:|
Zfish    52 LGWGYFSTVWLCVDLRSGRHVAVK----VLKSGAGFTQAGQDELTLLRCASGPTARNPLKGRIVQ 112

  Fly   108 PPHLDFFQ-------EIYVITELLQSDLH--KIIVSPQHLSADHIKVFLYQILRGLKYLHS-ARI 162
              .||.|:       .|.::.|||..||.  ::......||...:|..:.|:|.||:|||| .:|
Zfish   113 --LLDEFKLAGVNGIHICLVLELLGPDLRCWQMCFGNPGLSLSCVKHVITQVLEGLEYLHSHCKI 175

  Fly   163 LHRDIKPGNLLV--------------NSNCV------------------------LKICDFGLAR 189
            :|.||||.|:|:              :|:.:                        :||.|.|
Zfish   176 IHTDIKPENILLCFTPHPPGGDIHTYSSSAIRNTVLKAPGESGKLGTWGNLEDITVKIADLG--- 237

  Fly   190 VEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQ-NPVQQLE 253
             ......||..||:.|:.||:.|:|:|: .|..|.|:|||.|:..||.....||:.: .|...||
Zfish   238 -SSCWVYKHFCQEIQTRQYRSLEVLLGS-EYGPAADIWSVACLAFELATGDSLFEPKAGPNFSLE 300

  Fly   254 -----LITELLGTPTME----------------DMRHACEGARTHMLRRAPKPP--SFSVLYTLS 295
                 .|.||||...:.                |:|      |..:||     |  .:.||....
Zfish   301 EDHLAHIIELLGKIPVSVAQCGKYYYEYFNRKGDLR------RIAVLR-----PWGLYEVLVEKY 354

  Fly   296 SHATHEA---VHLLCQMLVFDPDKRISVTDALAHPYL 329
            .....||   ...|.|||.:.|::|.:....|.||:|
Zfish   355 HFLLREASLFSDFLLQMLNYLPERRATAAQCLKHPWL 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nmo	NP_001356976.1	STKc_NLK	39..411	CDD:173748	102/362 (28%)
si:ch211-220i18.4	XP_021325577.2	None