DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and Mapk12

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_068514.1 Gene:Mapk12 / 60352 RGDID:70975 Length:367 Species:Rattus norvegicus


Alignment Length:369 Identity:140/369 - (37%)
Similarity:218/369 - (59%) Gaps:44/369 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AVPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 99
            ||.||:|   |:|.||:|.|.:..|.|.|.:||:|||...|||.:.:||.:|||::|...:||||
  Rat    25 AVYQDLQ---PVGSGAYGAVCSAVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86

  Fly   100 LSALDILQPPH-LDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARIL 163
            :..||:..|.. ||.|.:.|::...:.:||.| ::..:.||.|.|:..:||:|:||||:|:|.::
  Rat    87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK-LMKHETLSEDRIQFLVYQMLKGLKYIHAAGVI 150

  Fly   164 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWS 228
            |||:|||||.||.:|.|||.||||||..:.:    ||..|||::|||||:::....|:..||:||
  Rat   151 HRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWS 211

  Fly   229 VGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMR--HACEGARTHM--LRRAPKPPSFS 289
            ||||..|::..:|||:..:.:.||:.|.::.|||..|.::  .:.| |:.:|  |....|....|
  Rat   212 VGCIMAEMITGKILFKGNDHLDQLKEIMKVTGTPPPEFVQKLQSAE-AKNYMEGLPELEKKDFAS 275

  Fly   290 VLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQY 354
            ||    ::|:.:||:||.:|||.|.::|::..:||||||.:..|                     
  Rat   276 VL----TNASPQAVNLLEKMLVLDAEQRVTAAEALAHPYFESLR--------------------- 315

  Fly   355 TADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVP 398
            ..:.||.| |.:||.::    .|.:..||..:...:::.:.:.|
  Rat   316 DTEDEPKA-QKYDDSFD----DVDRTLEEWKRVTYKEVLSFKPP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 137/365 (38%)
Mapk12NP_068514.1 STKc_p38gamma 11..353 CDD:143385 139/366 (38%)
TXY 183..185 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336804
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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