DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and mapk6

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001039017.1 Gene:mapk6 / 565830 ZFINID:ZDB-GENE-050420-7 Length:729 Species:Danio rerio


Alignment Length:430 Identity:130/430 - (30%)
Similarity:215/430 - (50%) Gaps:72/430 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQP 108
            :|:|||..|:|::..|....:|||:||:  |.....|.|...||:|::....|:|::...:.|.|
Zfish    24 KPLGYGGNGLVFSAVDTDCDKRVAVKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFETLGP 86

  Fly   109 ---------PHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILH 164
                     ..|.....:|::.|.:::||.|:: ....||.||.::|:||:||||||:|||.:||
Zfish    87 SGRRLTEDVSSLTEVNSVYIVQEYMETDLCKVL-EQGLLSEDHARLFMYQLLRGLKYIHSANVLH 150

  Fly   165 RDIKPGNLLVNS-NCVLKICDFGLARVEEPDQAK--HMTQEVVTQYYRAPEILMGARHYSSAVDV 226
            ||:||.||.||: :.||||.||||||:.:|..:.  |:::.:||::||:|.:|:...:|:.|:|:
Zfish   151 RDLKPANLFVNTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDM 215

  Fly   227 WSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVL 291
            |:.||||.|:|..:.||...:.::|::||.|.:.....|| |...:......::.....| .:.|
Zfish   216 WAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED-RLELQSVIPVFIKNDMSEP-HTPL 278

  Fly   292 YTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTA 356
            ..|....:.||:..|.::|.|:|..|::..:||||||:.:                    ..:..
Zfish   279 AKLLPGVSPEALDFLEKILTFNPMDRLTAEEALAHPYMSD--------------------YSFPL 323

  Fly   357 DFEPSAGQPF------DDL------------WERKLTSVQQVKEEMHKFIAEQLQ---------- 393
            | ||.:..||      ||:            |:|...| |...::.|.....:|:          
Zfish   324 D-EPVSLHPFHIEDEVDDILLMDESHSHVYNWDRYHES-QFSDQDWHLHSTHELEDVQRDPRAMS 386

  Fly   394 --TGRVPLCINPQSAAFKSFASSTVAHPS-ELPPSPHQWE 430
              |....:.|:|:. .........:..|| :|||. |.|:
Zfish   387 DVTDEEEVQIDPRK-YMDGDCEKFLEDPSFDLPPE-HLWQ 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 123/408 (30%)
mapk6NP_001039017.1 STKc_MAPK4_6 14..355 CDD:143359 114/356 (32%)
S_TKc 20..316 CDD:214567 106/296 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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