DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and nlk2

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_017206469.1 Gene:nlk2 / 563460 ZFINID:ZDB-GENE-080320-1 Length:533 Species:Danio rerio


Alignment Length:428 Identity:327/428 - (76%)
Similarity:369/428 - (86%) Gaps:8/428 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GGAAGGAPQGASAILAAAAP----YYQPPAVPQ---DVQPDRPIGYGAFGVVWAVTDPRDGRRVA 67
            |.||..||....|..|||..    ::|.....|   |::||||||||||||||:|||||||:|||
Zfish   107 GPAAAAAPAQVQAAAAAAVKVHHHHHQHSHHLQQQLDIEPDRPIGYGAFGVVWSVTDPRDGKRVA 171

  Fly    68 LKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPHLDFFQEIYVITELLQSDLHKII 132
            |||:|||||:|||.|||||||||||||||:|||||||||||||:|:|:||||:|||:||||||||
Zfish   172 LKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKII 236

  Fly   133 VSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAK 197
            ||||.||:||:|||||||||||||||||.|||||||||||||||||||||||||||||||.|:::
Zfish   237 VSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESR 301

  Fly   198 HMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTP 262
            |||||||||||||||||||:||||:|:|:|||||||.||||||||||||:|:|||:|||:|||||
Zfish   302 HMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP 366

  Fly   263 TMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHP 327
            ::|.||.||||||.|:||...|.||..|||||||.||||||||||:||||||.||||..||||||
Zfish   367 SLEAMRTACEGARAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHP 431

  Fly   328 YLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQL 392
            ||||||||||:||||||:|||:| |.||:||||.....|||.:|:.||||:||||.:|:||.||.
Zfish   432 YLDEGRLRYHTCMCKCCYTTSSG-RVYTSDFEPVTNPKFDDGFEKNLTSVRQVKEIIHQFILEQQ 495

  Fly   393 QTGRVPLCINPQSAAFKSFASSTVAHPSELPPSPHQWE 430
            :..||||||||||||||||.|||||.|||:||||..||
Zfish   496 KGNRVPLCINPQSAAFKSFISSTVAQPSEMPPSPLVWE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 300/371 (81%)
nlk2XP_017206469.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575915
Domainoid 1 1.000 506 1.000 Domainoid score I322
eggNOG 1 0.900 - - E1_KOG0664
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H88836
Inparanoid 1 1.050 661 1.000 Inparanoid score I739
OMA 1 1.010 - - QHG47979
OrthoDB 1 1.010 - - D309855at33208
OrthoFinder 1 1.000 - - FOG0005673
OrthoInspector 1 1.000 - - oto38700
orthoMCL 1 0.900 - - OOG6_107580
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2681
SonicParanoid 1 1.000 - - X4072
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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