DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and mapk12b

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001038306.1 Gene:mapk12b / 557810 ZFINID:ZDB-GENE-041210-123 Length:364 Species:Danio rerio


Alignment Length:390 Identity:145/390 - (37%)
Similarity:203/390 - (52%) Gaps:62/390 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LAAAAPYYQPPA------VPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSK 82
            |.:.|.:|:...      ||:..:....||.||:|.|.:..|.:.|.|||:|||...|||.:.:|
Zfish     3 LRSRAGFYRQEINRTVWDVPERYRDLIQIGTGAYGTVCSAIDRKTGVRVAIKKLHRPFQSRLFAK 67

  Fly    83 RVFRELKMLCFFKHENVLSALDILQPP-HLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVF 146
            |.:|||::|...|||||:..||:.... .||.|.:.|::...:.:||.| ::..:.|..|.::..
Zfish    68 RAYRELRLLKHMKHENVIGLLDVFTSEILLDRFHDFYLVMPFMGTDLGK-LMKMERLCEDRVQFL 131

  Fly   147 LYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAP 211
            :|||||||||:|||.|:|||:|||||.||.||.|||.||||||..:.:    ||..|||::||||
Zfish   132 VYQILRGLKYIHSAGIIHRDLKPGNLAVNQNCELKILDFGLARQADSE----MTGYVVTRWYRAP 192

  Fly   212 EILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGART 276
            |:::...|||..||:||||||..|:|..|.||:..:.:.||..|.::.|||..:.:.........
Zfish   193 EVILNWMHYSQTVDIWSVGCIMAEMLLGRTLFKGNDHLDQLREIMKITGTPAPDFITKLQSQDAK 257

  Fly   277 HMLRRAPKPPSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMC 341
            :.:|..||.|. ..|.|:...|:.|||..|..|||.|||||:|..:||..|...|.|        
Zfish   258 NYIRGLPKVPK-KDLNTIFFKASSEAVSALELMLVLDPDKRVSAAEALELPLFTEFR-------- 313

  Fly   342 KCCFTTSAGMRQYTADFEP---SAGQPFD----------DLWER-----------KLTSVQQVKE 382
                             ||   :...|:|          |.|:|           .:|.::..||
Zfish   314 -----------------EPEEETEALPYDHSMDNTELPLDQWKRHTFTEILSFQPPVTEIRDSKE 361

  Fly   383  382
            Zfish   362  361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 140/369 (38%)
mapk12bNP_001038306.1 PKc_like 9..351 CDD:304357 140/372 (38%)
S_TKc 25..307 CDD:214567 127/287 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575923
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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