DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and mapk12b

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001038306.1 Gene:mapk12b / 557810 ZFINID:ZDB-GENE-041210-123 Length:364 Species:Danio rerio


Alignment Length:390 Identity:145/390 - (37%)
Similarity:203/390 - (52%) Gaps:62/390 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LAAAAPYYQPPA------VPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSK 82
            |.:.|.:|:...      ||:..:....||.||:|.|.:..|.:.|.|||:|||...|||.:.:|
Zfish     3 LRSRAGFYRQEINRTVWDVPERYRDLIQIGTGAYGTVCSAIDRKTGVRVAIKKLHRPFQSRLFAK 67

  Fly    83 RVFRELKMLCFFKHENVLSALDILQPP-HLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVF 146
            |.:|||::|...|||||:..||:.... .||.|.:.|::...:.:||.| ::..:.|..|.::..
Zfish    68 RAYRELRLLKHMKHENVIGLLDVFTSEILLDRFHDFYLVMPFMGTDLGK-LMKMERLCEDRVQFL 131

  Fly   147 LYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAP 211
            :|||||||||:|||.|:|||:|||||.||.||.|||.||||||..:.:    ||..|||::||||
Zfish   132 VYQILRGLKYIHSAGIIHRDLKPGNLAVNQNCELKILDFGLARQADSE----MTGYVVTRWYRAP 192

  Fly   212 EILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGART 276
            |:::...|||..||:||||||..|:|..|.||:..:.:.||..|.::.|||..:.:.........
Zfish   193 EVILNWMHYSQTVDIWSVGCIMAEMLLGRTLFKGNDHLDQLREIMKITGTPAPDFITKLQSQDAK 257

  Fly   277 HMLRRAPKPPSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMC 341
            :.:|..||.|. ..|.|:...|:.|||..|..|||.|||||:|..:||..|...|.|        
Zfish   258 NYIRGLPKVPK-KDLNTIFFKASSEAVSALELMLVLDPDKRVSAAEALELPLFTEFR-------- 313

  Fly   342 KCCFTTSAGMRQYTADFEP---SAGQPFD----------DLWER-----------KLTSVQQVKE 382
                             ||   :...|:|          |.|:|           .:|.::..||
Zfish   314 -----------------EPEEETEALPYDHSMDNTELPLDQWKRHTFTEILSFQPPVTEIRDSKE 361

  Fly   383  382
            Zfish   362  361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 140/369 (38%)
mapk12bNP_001038306.1 Protein Kinases, catalytic domain 9..351 CDD:473864 140/372 (38%)

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