DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and mapk1

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001017127.1 Gene:mapk1 / 549881 XenbaseID:XB-GENE-479467 Length:361 Species:Xenopus tropicalis


Alignment Length:385 Identity:152/385 - (39%)
Similarity:223/385 - (57%) Gaps:49/385 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LAAAAPYYQPPAVPQ-------DVQPDRP----IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQS 77
            :|||.....|...|:       ||.|...    ||.||:|:|.:..|..:..|||:||: :.|:.
 Frog     1 MAAAGASSNPGGGPEMVRGQAFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEH 64

  Fly    78 LVSSKRVFRELKMLCFFKHENVLSALDILQPPHLDFFQEIYVITELLQSDLHKIIVSPQHLSADH 142
            ....:|..||:|:|..|||||::...||::.|.::..:::|::.:|:::||:|:: ..||||.||
 Frog    65 QTYCQRTLREIKILLRFKHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQHLSNDH 128

  Fly   143 IKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEP--DQAKHMTQEVVT 205
            |..|||||||||||:|||.:||||:||.|||:|:.|.|||||||||||.:|  |....:|:.|.|
 Frog   129 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 193

  Fly   206 QYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHA 270
            ::||||||::.::.|:.::|:||||||..|:|..|.:|..::.:.||..|..:||:|:.||:...
 Frog   194 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 258

  Fly   271 CE-GARTHMLRRAPKPPSFSVLYT-LSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGR 333
            .. .||.::|   ..|....|.:. |..:|..:|:.||.:||.|:|.|||.|..|||||||::  
 Frog   259 INLKARNYLL---SLPHKNKVPWNRLFPNADPKALDLLDKMLTFNPHKRIEVEAALAHPYLEQ-- 318

  Fly   334 LRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPF------DDLWERKLTSVQQVKEEMHKF 387
                               .|....||.|..||      |||  .|.|..:.:.||..:|
 Frog   319 -------------------YYDPSDEPVAEAPFKFEMELDDL--PKETLKELIFEETARF 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 147/363 (40%)
mapk1NP_001017127.1 STKc_ERK1_2_like 22..356 CDD:270839 146/361 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309855at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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