DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nmo and mapk12

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001017080.1 Gene:mapk12 / 549834 XenbaseID:XB-GENE-485782 Length:363 Species:Xenopus tropicalis


Alignment Length:359 Identity:137/359 - (38%)
Similarity:207/359 - (57%) Gaps:40/359 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPH 110
            :|.||:|.|.:..|.|.|.:||:|||...|||.:.:||.:|||::|...:||||:..||:..|..
 Frog    33 VGSGAYGTVCSSLDTRTGTKVAIKKLYRPFQSELFAKRAYRELRLLKHMQHENVIGLLDVFTPDS 97

  Fly   111 -LDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLV 174
             |:.|.:.|::...:.:||.| |:..:.||.|.|:..:|||||||||:|||.|:|||:|||||.|
 Frog    98 TLENFNDFYLVMPFMGTDLGK-IMKHEKLSEDRIQFLVYQILRGLKYIHSAGIIHRDLKPGNLAV 161

  Fly   175 NSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGR 239
            |.:|.|||.||||||..:.:    ||..|||::|||||:::...||:..||:||||||..|:...
 Frog   162 NEDCELKILDFGLARHTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMYTG 222

  Fly   240 RILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPK--PPSFSVLYTLSSHATHEA 302
            |.||:..:.:.||..|.::.||||.:.::........:.::..||  ...|.   :|..:|...|
 Frog   223 RPLFKGNDHLDQLTEIMKITGTPTQDFVQKLQSPDAKNYIKSLPKVQKKDFG---SLLRYANPLA 284

  Fly   303 VHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPFD 367
            |::|.:|||.|.:|||:.|:||||||.::    :|.                 .|.|..| :|:|
 Frog   285 VNILEKMLVLDAEKRITATEALAHPYFEQ----FHD-----------------IDDETEA-EPYD 327

  Fly   368 DLWERKLTSVQQVKEEMHK-------FIAEQLQT 394
            |.::.....:::.:...||       .:|:..:|
 Frog   328 DSFDNVNLPLEEWRRLTHKELTSYKPLVADSKET 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 137/359 (38%)
mapk12NP_001017080.1 STKc_p38gamma 11..353 CDD:143385 135/349 (39%)

Return to query results.
Submit another query.