DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and p38b

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster


Alignment Length:309 Identity:139/309 - (44%)
Similarity:191/309 - (61%) Gaps:20/309 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVL 100
            :|:..|..:|:|.||:|.|..........:||:|||...|||.|.:||.:|||::|....||||:
  Fly    20 IPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVI 84

  Fly   101 SALDILQP----PHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSAR 161
            ..||:..|    ..||.||::|::|.|:.:||:.|| ..|.||.||::..:|||||||||:|||.
  Fly    85 GLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNII-RTQKLSDDHVQFLVYQILRGLKYIHSAG 148

  Fly   162 ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDV 226
            ::|||:||.|:.||.:|.|:|.||||||..|.:    ||..|.|::||||||::...||:...|:
  Fly   149 VIHRDLKPSNIAVNEDCELRILDFGLARPAESE----MTGYVATRWYRAPEIMLNWMHYNQTADI 209

  Fly   227 WSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDM-RHACEGARTHMLRRAPKPP--SF 288
            ||||||..|||..|.||...:.:.||.||.|:||||..|.| |.:.|.||.: :|..|..|  :|
  Fly   210 WSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNY-IRSLPVMPRRNF 273

  Fly   289 SVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYH 337
            ..::   ..|...|:.||.:||..|.||||:...||||||::    :||
  Fly   274 RDIF---RGANPLAIDLLEKMLELDADKRITAEQALAHPYME----KYH 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 138/306 (45%)
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 139/309 (45%)
S_TKc 24..311 CDD:214567 135/295 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442172
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34458at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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