DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and rl

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:405 Identity:153/405 - (37%)
Similarity:227/405 - (56%) Gaps:57/405 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SMSLVQGGAAGGAPQGASAILAA----AAPYYQPPAVPQDVQPDRPIGYGAFGVVWAVTDPRDGR 64
            |.|:|.|..:...||..:.::..    ..|.|...|.         ||.||:|:|.:..|....:
  Fly     7 SGSVVNGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAY---------IGEGAYGMVVSADDTLTNQ 62

  Fly    65 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPHLDFFQEIYVITELLQSDLH 129
            |||:||: :.|:.....:|..||:.:|..|||||::...|||:...:|..:::|::..|:::||:
  Fly    63 RVAIKKI-SPFEHQTYCQRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLY 126

  Fly   130 KIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEP- 193
            |:: ..|.||.|||..|||||||||||:|||.:||||:||.|||:|..|.||||||||||:.:| 
  Fly   127 KLL-KTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPE 190

  Fly   194 -DQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITE 257
             |....:|:.|.|::||||||::.::.|:.::|:||||||..|:|..|.:|..::.:.||..|..
  Fly   191 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 255

  Fly   258 LLGTPTMEDMRHAC---EGARTHMLRRAPKPPS--FSVLYTLSSHATHEAVHLLCQMLVFDPDKR 317
            :||:|:.:|:.  |   |.||.: |...|..|:  ::.|:   .:|...|:.||.:||.|:|.||
  Fly   256 VLGSPSRDDLE--CIINEKARNY-LESLPFKPNVPWAKLF---PNADALALDLLGKMLTFNPHKR 314

  Fly   318 ISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPF------DDLWERKLTS 376
            |.|.:|||||||::                     .|....||.|..||      ||:....|.|
  Fly   315 IPVEEALAHPYLEQ---------------------YYDPGDEPVAEVPFRINMENDDISRDALKS 358

  Fly   377 VQQVKEEMHKFIAEQ 391
            :  :.||..||...|
  Fly   359 L--IFEETLKFKERQ 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 144/366 (39%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 144/373 (39%)

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