DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and Mapk12

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_006521121.1 Gene:Mapk12 / 29857 MGIID:1353438 Length:390 Species:Mus musculus


Alignment Length:391 Identity:138/391 - (35%)
Similarity:215/391 - (54%) Gaps:65/391 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AVPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 99
            ||.||:|   |:|.||:|.|.:..|.|.|.:||:|||...|||.:.:||.:|||::|...:||||
Mouse    25 AVYQDLQ---PVGSGAYGAVCSAVDSRTGNKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86

  Fly   100 LSALDILQPPH-LDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARIL 163
            :..||:..|.. ||.|.:.|::...:.:||.| ::..:.||.|.|:..:||:|:||||:|:|.::
Mouse    87 IGLLDVFTPDESLDDFTDFYLVMPFMGTDLGK-LMKHETLSEDRIQFLVYQMLKGLKYIHAAGVI 150

  Fly   164 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWS 228
            |||:|||||.||.:|.|||.||||||..:.:    ||..|||::|||||:::....|:..||:||
Mouse   151 HRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWS 211

  Fly   229 VGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEG-------------------- 273
            ||||..|::..:|||:..:.:.||:.|.::.|||..|.::.....                    
Mouse   212 VGCIMAEMITGKILFKGNDHLDQLKEIMKITGTPPPEFVQKLQSAEVSGSGWWAGLGLGGWPITL 276

  Fly   274 ----ARTHM--LRRAPKPPSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEG 332
                |:.:|  |....|....|||    ::|:.:||:||.:|||.|.::|::..:||.|||.:..
Mouse   277 FPSQAKNYMEGLPELEKKDFASVL----TNASPQAVNLLERMLVLDAEQRVTAAEALTHPYFESL 337

  Fly   333 RLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRV 397
            |                     ..:.||.| |.:||.::    .|.:..||..:...:::.:.:.
Mouse   338 R---------------------DTEDEPKA-QKYDDSFD----DVDRTLEEWKRVTYKEVLSFKP 376

  Fly   398 P 398
            |
Mouse   377 P 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 135/387 (35%)
Mapk12XP_006521121.1 STKc_p38gamma 11..376 CDD:143385 137/388 (35%)

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