DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and Mapk13

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_062104.3 Gene:Mapk13 / 29513 RGDID:3045 Length:366 Species:Rattus norvegicus


Alignment Length:347 Identity:136/347 - (39%)
Similarity:202/347 - (58%) Gaps:33/347 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQP-P 109
            :|.||:|.|.:..|.|.|.:||:|||...|||.:.:||.:|||.:|....||||:..||:..| .
  Rat    31 VGSGAYGAVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMHHENVIGLLDVYTPAT 95

  Fly   110 HLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLV 174
            .:..||:.|::...:|:||.||:  ....|.:.::..:||:|:||||:|||.|:|||:|||||.|
  Rat    96 SVRNFQDFYLVMPFMQTDLQKIM--GMEFSEEKVQYLVYQMLKGLKYIHSAGIVHRDLKPGNLAV 158

  Fly   175 NSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGR 239
            |.:|.|||.||||||..:.:    ||..|||::|||||:::...||:..||:||||||..|:|..
  Rat   159 NEDCELKILDFGLARHTDAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 219

  Fly   240 RILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPP--SFSVLYTLSSHATHEA 302
            :.||:.::.:.||..|.::.|.|..|.::...:.|....::..|:.|  .|:.|:   ..|:.:|
  Rat   220 KTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAKSYIQSLPQSPKKDFTQLF---PRASPQA 281

  Fly   303 VHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPFD 367
            |.||.:||..|.|||::...|||||:.:..|                     ..:.|..|.||||
  Rat   282 VDLLDKMLELDVDKRLTAAQALAHPFFEPFR---------------------DPEEETEAQQPFD 325

  Fly   368 DLWERKLTSVQQVKEEMHKFIA 389
            |..||:..||.:.|:.::|.||
  Rat   326 DALEREKLSVDEWKQHIYKEIA 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 136/347 (39%)
Mapk13NP_062104.3 STKc_p38delta 9..351 CDD:143384 136/347 (39%)
TXY 180..182 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336802
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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