DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and Mapk3

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_036082.1 Gene:Mapk3 / 26417 MGIID:1346859 Length:380 Species:Mus musculus


Alignment Length:401 Identity:149/401 - (37%)
Similarity:233/401 - (58%) Gaps:61/401 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAAGGAPQGASAILAAAAPYYQPPAVPQDVQ--PDRP------------IGYGAFGVVWAVTDPR 61
            |..||.|:|.:.::         |.||.:|:  ..:|            ||.||:|:|.:..|..
Mouse     9 GGGGGEPRGTAGVV---------PVVPGEVEVVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHV 64

  Fly    62 DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPHLDFFQEIYVITELLQS 126
            ...|||:||: :.|:.....:|..||:::|..|:||||:...|||:.|.|:..:::|::.:|:::
Mouse    65 RKTRVAIKKI-SPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRAPTLEAMRDVYIVQDLMET 128

  Fly   127 DLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVE 191
            ||:|::.| |.||.|||..|||||||||||:|||.:||||:||.|||:|:.|.||||||||||:.
Mouse   129 DLYKLLKS-QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIA 192

  Fly   192 EP--DQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLEL 254
            :|  |....:|:.|.|::||||||::.::.|:.::|:||||||..|:|..|.:|..::.:.||..
Mouse   193 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 257

  Fly   255 ITELLGTPTMEDMRHACEGARTHMLRRAPKPP--SFSVLYTLSSHATHEAVHLLCQMLVFDPDKR 317
            |..:||:|:.||:.........:.|:..|...  :::.|:..|.   .:|:.||.:||.|:|:||
Mouse   258 ILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSD---SKALDLLDRMLTFNPNKR 319

  Fly   318 ISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPF------DDLWERKLTS 376
            |:|.:|||||||::                     .|....||.|.:||      |||.:.:|..
Mouse   320 ITVEEALAHPYLEQ---------------------YYDPTDEPVAEEPFTFDMELDDLPKERLKE 363

  Fly   377 VQQVKEEMHKF 387
            :  :.:|..:|
Mouse   364 L--IFQETARF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 141/373 (38%)
Mapk3NP_036082.1 STKc_ERK1_2_like 37..371 CDD:270839 138/361 (38%)
TXY 203..205 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833234
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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