DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and pmk1

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_595289.1 Gene:pmk1 / 2539920 PomBaseID:SPBC119.08 Length:422 Species:Schizosaccharomyces pombe


Alignment Length:425 Identity:164/425 - (38%)
Similarity:231/425 - (54%) Gaps:56/425 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VQPD----RPIGYGAFGVVWAVTD--PRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HE 97
            |:|:    :.:|.||:|:|.|..:  .:|...||:||:.|||...:.:||..||:|:|..|: |.
pombe    17 VEPNFKVVKELGQGAYGIVCAARNVASKDQEAVAIKKITNVFSKSILTKRALREIKLLIHFRNHR 81

  Fly    98 NV--LSALDILQPPHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSA 160
            |:  :..|||:.|.:   |.|:|:..||:::||:.||.|.|.|:..|.:.|:||||.||||:|||
pombe    82 NITCIYDLDIINPYN---FNEVYIYEELMEADLNAIIKSGQPLTDAHFQSFIYQILCGLKYIHSA 143

  Fly   161 RILHRDIKPGNLLVNSNCVLKICDFGLAR--VEEPDQ-AKHMTQEVVTQYYRAPEILMGARHYSS 222
            .::|||:||||||||::|.||||||||||  .|.|:: ...||:.|.|::||||||::....|..
pombe   144 NVIHRDLKPGNLLVNADCELKICDFGLARGCSENPEENPGFMTEYVATRWYRAPEIMLSFSSYHK 208

  Fly   223 AVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPK--P 285
            .:||||||||..||||...||:.::.|.||.||...||||..|.:.|.........:|..||  |
pombe   209 GIDVWSVGCILAELLGGTPLFKGKDFVHQLNLILHQLGTPDEETLSHISSSRAQEYVRSLPKQRP 273

  Fly   286 PSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYL-------DEGRLRYHSCMCKC 343
            ..|.   |....|...|:.||.::|.|||::||||.|||.||||       ||.       :|..
pombe   274 IPFE---TNFPKANPLALDLLAKLLAFDPNRRISVDDALEHPYLAVWHDPSDEP-------VCDS 328

  Fly   344 CFTTSAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKF-----IAEQLQTGRVPLCINP 403
            .|..|.   :|..|.........|::    |...|:|:...|..     |.:..||  ||   :.
pombe   329 VFDFSF---EYIEDANELRRVILDEV----LNFRQKVRRRSHPTNPTVNIPQPAQT--VP---SN 381

  Fly   404 QSAAFKSFASSTVAHPSELPPSPHQWEXRQNEAIA 438
            .:.:| :.:||:.:..|......|.:    ||..|
pombe   382 DNGSF-NVSSSSSSQTSNKKRHDHSY----NETAA 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 157/396 (40%)
pmk1NP_595289.1 STKc_MPK1 20..351 CDD:173750 145/346 (42%)

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