DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and pmk-2

DIOPT Version :10

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_741457.2 Gene:pmk-2 / 177611 WormBaseID:WBGene00004056 Length:402 Species:Caenorhabditis elegans


Alignment Length:344 Identity:138/344 - (40%)
Similarity:193/344 - (56%) Gaps:24/344 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VSMSLVQGGAAGGAPQGASAILAAAAPYYQPP------------AVPQDVQPDRPIGYGAFGVVW 55
            :.||...|.:| ..|....|....|.|...|.            .:||.....:|:|.||:|||.
 Worm     1 MGMSATMGDSA-SIPGVFFADFGPAPPEITPEGYHEVELNKTKWVLPQWYNSLKPLGEGAYGVVC 64

  Fly    56 AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQP-PHLDFFQEIYV 119
            .......|.|||:||....|||.:.:||.:||||:|...:|:|||..:|:..| |.......:|.
 Worm    65 TAEYEPTGDRVAIKKFFRPFQSTIHAKRTYRELKLLRTLQHDNVLEMIDVFTPDPDASSLNNVYF 129

  Fly   120 ITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICD 184
            ::.|:.|||.. |:..|.|:.:.|::.:||:||||||:|||.|:|||:||.|:.||..|.:||.|
 Worm   130 VSVLMGSDLQN-IMKIQRLTDEQIQLLIYQVLRGLKYIHSAGIIHRDLKPSNIAVNERCEVKILD 193

  Fly   185 FGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPV 249
            |||||.::.:    ||..|.|::||||||::...||:..|||||||||..||:..|.||...:.:
 Worm   194 FGLARAQDAE----MTGYVATRWYRAPEIMLNWMHYTQTVDVWSVGCILAELVSGRPLFPGDDHI 254

  Fly   250 QQLELITELLGTPTMED-MRHACEGARTHMLRRAP-KPPSFSVLYTLSSHATHEAVHLLCQMLVF 312
            .||..|..::|||..|. .:...|.||.::..|:| ....|..|:.:   |:..|:.||..||:.
 Worm   255 DQLTKIMSVVGTPKEEFWSKIQSEEARNYIKNRSPIIRQDFVTLFPM---ASPYALELLEMMLIL 316

  Fly   313 DPDKRISVTDALAHPYLDE 331
            |||:||||:.||.|.||.|
 Worm   317 DPDRRISVSSALRHDYLRE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 127/296 (43%)
pmk-2NP_741457.2 STKc_p38 33..381 CDD:143356 129/311 (41%)

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