DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nmo and lit-1

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001022805.1 Gene:lit-1 / 176808 WormBaseID:WBGene00003048 Length:634 Species:Caenorhabditis elegans


Alignment Length:422 Identity:267/422 - (63%)
Similarity:330/422 - (78%) Gaps:11/422 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PQ----GASAILAAAAPYYQPPAVPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQS 77
            ||    .::||||||.|:|.||.  ||.|||||||||||||||:|||||.|:||||||:|||||:
 Worm   215 PQVAHVSSNAILAAAQPFYPPPV--QDSQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN 277

  Fly    78 LVSSKRVFRELKMLCFFKHENVLSALDILQPPHLDFFQEIYVITELLQSDLHKIIVSPQHLSADH 142
            |.|.||||||:|||..|:|:||||.||||||.:..||||:||:|||:||||||||||||.|:.||
 Worm   278 LASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQALTPDH 342

  Fly   143 IKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQY 207
            :|||:|||||||||||:|.|||||||||||||||||:||||||||||..:.....:||.||||||
 Worm   343 VKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQY 407

  Fly   208 YRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACE 272
            |||||:|||||.|:.|||:|||||||.|||.|:|||||..|::||::|.:|||||:.|.|::|||
 Worm   408 YRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 472

  Fly   273 GARTHMLRRAPKPPSFSVLYTLSS--HATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLR 335
            ||:.|:||...:.|....||.::|  ...||||.||.::|.|||||||||.:||.|.||:|||||
 Worm   473 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLR 537

  Fly   336 YHSCMCKCCFT-TSAGMRQYTADFEPSAGQPFDDLWERKLT--SVQQVKEEMHKFIAEQLQTGRV 397
            :|||||.||:| .:...|.:..|.:|....|||..||:.::  |:.:::|:|::|:.::.....|
 Worm   538 FHSCMCSCCYTKPNMPSRLFAQDLDPRHESPFDPKWEKDMSRLSMFELREKMYQFVMDRPALYGV 602

  Fly   398 PLCINPQSAAFKSFASSTVAHPSELPPSPHQW 429
            .|||||||||:|:||||:||..|||||||..|
 Worm   603 ALCINPQSAAYKNFASSSVAQASELPPSPQAW 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 240/376 (64%)
lit-1NP_001022805.1 STKc_NLK 239..616 CDD:173748 240/376 (64%)
S_TKc 244..531 CDD:214567 198/286 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167624
Domainoid 1 1.000 412 1.000 Domainoid score I343
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H88836
Inparanoid 1 1.050 540 1.000 Inparanoid score I639
Isobase 1 0.950 - 0 Normalized mean entropy S657
OMA 1 1.010 - - QHG47979
OrthoDB 1 1.010 - - D309855at33208
OrthoFinder 1 1.000 - - FOG0005673
OrthoInspector 1 1.000 - - oto19371
orthoMCL 1 0.900 - - OOG6_107580
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2681
SonicParanoid 1 1.000 - - X4072
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

Return to query results.
Submit another query.