DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nmo and XB956263

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_002938433.1 Gene:XB956263 / 100145045 XenbaseID:XB-GENE-956264 Length:359 Species:Xenopus tropicalis


Alignment Length:348 Identity:137/348 - (39%)
Similarity:200/348 - (57%) Gaps:43/348 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPH 110
            :|.||:|.|.:..|...|.|||:|||...|||||.:||.:|||::|...|||||:|.|::..|..
 Frog    31 VGSGAYGTVCSAQDRLTGERVAIKKLLRPFQSLVHAKRAYRELRLLKHMKHENVISLLNVFTPDE 95

  Fly   111 -LDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLV 174
             ::.||..|::...:..||.: ::..|.|:...|...||||||||:|:|:|.|:|||:||.||.|
 Frog    96 SMETFQTFYLVMPFIAVDLSR-VMRMQRLNHSTIVYLLYQILRGLQYIHAAGIVHRDLKPSNLGV 159

  Fly   175 NSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGR 239
            |.:..|||.||||||..|.:    ||..|||::|||||:::...||:..||:||||||..|::..
 Frog   160 NEDYELKILDFGLARPTEFE----MTGYVVTRWYRAPEVILNWMHYNHTVDIWSVGCILAEMITG 220

  Fly   240 RILFQAQNPVQQLELITELLGTP------TMEDMRHACEGARTHMLRRAPKPPSFSVLY-TLSSH 297
            ::||...:...:|..|.|:.|:|      .||. .||.:..:  ||.:..| .:|..|: |:|:.
 Frog   221 KVLFPGGDYFDELNKIIEVTGSPQPSLINKMES-SHAQDYVK--MLPKKQK-KNFKELFPTMSAV 281

  Fly   298 ATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSA 362
            .|    .||.:||..||..|::.|:|||||||:|    |:.                 :|.:|:|
 Frog   282 ET----DLLEKMLDLDPGTRVNATEALAHPYLEE----YND-----------------SDPDPTA 321

  Fly   363 GQPFDDLWERKLTSVQQVKEEMH 385
            .: :||.:|....:|.:.|...|
 Frog   322 DK-YDDSFESLDLNVHEWKSLSH 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 137/348 (39%)
XB956263XP_002938433.1 STKc_p38 9..351 CDD:143356 137/348 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.