DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmo and mapk13

DIOPT Version :9

Sequence 1:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_001337833.2 Gene:mapk13 / 100002318 ZFINID:ZDB-GENE-041111-17 Length:362 Species:Danio rerio


Alignment Length:352 Identity:134/352 - (38%)
Similarity:198/352 - (56%) Gaps:39/352 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQP 108
            :.||.||:|.|.:..:.:...:||:|||...|||.:.:||.:|||::|...|||||:..||:..|
Zfish    27 KQIGTGAYGSVCSSINNKTKEKVAIKKLHRPFQSEIFAKRAYRELRLLKHMKHENVIGLLDVFTP 91

  Fly   109 -PHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNL 172
             ..||.||:.|::...:.:||.|:   ...|:.|.|:..:||:|.||||:|.|.|:|||:|||||
Zfish    92 ATRLDEFQDFYLVMPYMYTDLSKV---KGLLTEDRIQFLVYQMLCGLKYIHGAGIIHRDLKPGNL 153

  Fly   173 LVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELL 237
            .||.:|.|||.||||||..:.:    ||..|||::|||||:::...||:..||:||||||.||:.
Zfish   154 AVNQDCELKILDFGLARHTDAE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMGEMF 214

  Fly   238 GRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPP--SFSVLYTLSSHATH 300
            ..:.||:.::.:.||..|.::.|||..|.:...........:|..|..|  .||   ||...|:.
Zfish   215 NGKTLFKGKDYMDQLTQIMKVAGTPGPEFVEKLESPEAKSYVRSLPHYPHRDFS---TLFPRASK 276

  Fly   301 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQP 365
            :||.||.:|||.|.|.|::.:.||||.|.|                   |:|......||:|   
Zfish   277 KAVELLEKMLVLDADARLTASGALAHSYFD-------------------GLRDPDDWPEPTA--- 319

  Fly   366 FDDLWERKLTSVQQVK----EEMHKFI 388
            :||.::.....:::.|    :|:..|:
Zfish   320 YDDSYDNATLPLEEWKRLSFKEVRSFV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 134/352 (38%)
mapk13XP_001337833.2 PKc_like 7..347 CDD:304357 134/352 (38%)
S_TKc 23..305 CDD:214567 122/287 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575922
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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