DRSC/TRiP Functional Genomics Resources

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Protein Alignment KRT83 and si:dkey-183i3.5

DIOPT Version :9

Sequence 1:NP_002273.3 Gene:KRT83 / 3889 HGNCID:6460 Length:493 Species:Homo sapiens
Sequence 2:NP_001373183.1 Gene:si:dkey-183i3.5 / 566445 ZFINID:ZDB-GENE-030131-8568 Length:589 Species:Danio rerio


Alignment Length:517 Identity:132/517 - (25%)
Similarity:232/517 - (44%) Gaps:86/517 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     8 IGCGFRPGNFSCVSACGPRPSRCCITAAPYRGISCYRGLTGGF----GSHSVCGGFRAGSCG-RS 67
            :|.||..|                  |....|.....||.||.    |...:.||...|:.| |:
Zfish    50 LGLGFGAG------------------AGAVAGAGAGLGLGGGSLALGGGLGLGGGLGLGAGGARA 96

Human    68 FGYRSG---------------GVCGPSPPCITTVSVNESLLTPLNLEIDPN------AQCVKQEE 111
            .|.|:|               |..|.:|..|::.:..::.::|:. .|||:      .|..:.:|
Zfish    97 AGVRAGVAHLRSHLGGRVFKIGGYGFNPSFISSTTTVDAGVSPMP-SIDPSLPSPDTVQVTRMKE 160

Human   112 KEQIKSLNSRFAAFIDKVRFLEQQNKLLETKLQFYQNRECCQ---SNLEPLFAGYIETLRREAEC 173
            ||::::||.:||:||||.|.|||.|.:|..|:..:.|.|  |   :|...|....|...:.:.:.
Zfish   161 KEELQALNDKFASFIDKARSLEQHNAVLRAKISMFTNPE--QGGPANTSVLLTSAIGAYKSQIDS 223

Human   174 VEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVALKKDVDCAYLRKSDLEANVEALI 238
            :.:....:.:|:.|.:.::|..:.:||||.:...:.|.::.|||::||..||...:|:.::..|.
Zfish   224 LSSTKEAIIAEIEHFKAIIEDDQARYEEETSQTKSLELDWTALKEEVDNLYLTLFELQTSICGLE 288

Human   239 QEIDFLRRLYE---EEIRILQSHISDTSVVVKLDNSRDL-NMDCIVAEIKAQYDDIATRSRAEAE 299
            .:|...:::|:   :|:|.:.:....::|.:.:||:... ::...:.|:||.|:.:|.||:.||.
Zfish   289 DQIALSKQVYDAKVKEVRTIVTGGVKSAVSISVDNAAQAQDLTSALTEVKAHYETLAQRSKQEAL 353

Human   300 SWYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRLTAEVENAKCQNSKLEAAVAQSEQQGEA 364
            ...:.....|..:.....:||...|:|:......|..:..|:|..|..|.:||:.|.::|....:
Zfish   354 VSVQDSLSMMSVSSQPSSQTLTSAKDELRAYKLQIDSVQREIERLKSLNLQLESQVEEAECHSNS 418

Human   365 ALSDARCKLAELEGALQKAKQDMACLIREYQEVMNSKLGLDIEIATYRRLLEGEEQRLCEGVEAV 429
            .....:.::..|:..|...::.:....:||||::.||:.||:||..|::||:.||.||..|    
Zfish   419 HTETYQDQVLTLKSQLDDLRKQITQYGQEYQELLASKMSLDVEITAYKKLLDSEENRLKSG---- 479

Human   430 NVCVSSSRGGVVCGDLCVSGSRPVTGSVCSAPCNGNLVVSTGLCKPCGQLNTTCGGGSCGQG 491
                    |||.     |..|:.:.|               |.....|.|....||...|.|
Zfish   480 --------GGVT-----VHMSKTLLG---------------GGAGGAGGLGAGAGGAGLGGG 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT83NP_002273.3 Head 1..111 28/128 (22%)
Keratin_2_head 4..107 CDD:292825 28/124 (23%)
Filament 110..421 CDD:278467 88/317 (28%)
Coil 1A 112..146 17/33 (52%)
Linker 1 147..156 3/11 (27%)
Coil 1B 157..257 23/102 (23%)
BAR 235..425 CDD:299863 50/193 (26%)
Linker 12 258..274 3/15 (20%)
Coil 2 275..418 38/142 (27%)
RILP-like <320..>388 CDD:304877 14/67 (21%)
Tail 419..493 17/73 (23%)
si:dkey-183i3.5NP_001373183.1 Filament 160..475 CDD:365827 88/316 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28N6C
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46601
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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