Protein Alignment Pop4 and POP4

DIOPT Version :10

• Sequence 1: NP_648168.1
• Gene: Pop4 / 38889
• FlyBaseID: FBgn0035831
• Length: 206
• Species: Drosophila melanogaster
• Sequence 2: NP_009816.1
• Gene: POP4 / 852560
• SGDID: S000000461
• Length: 279
• Species: Saccharomyces cerevisiae
• Alignment Length: 225
• Identity: 50/225 - (22%)
• Similarity: 95/225 - (42%)
• Gaps: 52/225 - (23%)

  Fly    20 QRCNVNI-NPDHITMLEGTKIKKQHSRKRRAHKSSTLSRREYA-ALGLNTLPTKQMKYE------ 76
            ::..:|: |...::.||....:.:....:|.:|:|.::.|||. ....||....::.||
Yeast    51 RKSKLNLDNLQKVSQLESADKQLEKRDYQRINKNSKIALREYINNCKKNTKKCLKLAYENKITDK 115

  Fly    77 ---------------EALPLH--------HLWKGYVREHLELREGDEVPQVHDARYDEFSRKLVK 118
                           |:||.:        .||..|::|.|.:.:        :.:....|..|:|
Yeast   116 EDLLHYIEEKHPTIYESLPQYVDFVPMYKELWINYIKELLNITK--------NLKTFNGSLALLK 172

  Fly   119 L---DLHGAKMKVLQSKCSTLENLAGICVMDTKNVLKLLGKDH---RLRTIPKSECVFGMKV--- 174
            |   |.:||.::|.:||..||..|.||.:.|::....::.|.:   .::.|||...||..::
Yeast   173 LSMADYNGALLRVTKSKNKTLIGLQGIVIWDSQKFFIMIVKGNIIDEIKCIPKKGTVFQFEIPIS 237

  Fly   175 ----GNMEFTIFGQHLNIRPAERSVKKIKN 200
                ..:.::|.|.....|..:|:.:|.|:
Yeast   238 DDDDSALRYSILGDRFKYRSVDRAGRKFKS 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pop4	NP_648168.1	POP4	111..201	CDD:197780	28/103 (27%)
POP4	NP_009816.1	RNase_P-MRP_p29	172..263	CDD:460367	24/90 (27%)