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Protein Alignment Pop4 and pop4
DIOPT Version :9
Sequence 1: | NP_648168.1 |
Gene: | Pop4 / 38889 |
FlyBaseID: | FBgn0035831 |
Length: | 206 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001018585.1 |
Gene: | pop4 / 553787 |
ZFINID: | ZDB-GENE-050522-505 |
Length: | 219 |
Species: | Danio rerio |
Alignment Length: | 160 |
Identity: | 59/160 - (36%) |
Similarity: | 88/160 - (55%) |
Gaps: | 9/160 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 KQHSRKRRAHKSSTLSRREYAALGLNTLPTKQMKYEEALPLHHLWKGYVREHLE-LREGDEVPQV 104
|:..:|.:..|:..|:.:|...|.:..|..:..|||..||||.|||.|:.:... |:.|.. |||
Zfish 61 KRPKKKVKKVKAKGLNAKERRRLQIFQLKPEHQKYELFLPLHELWKSYIEDLCNGLKPGSN-PQV 124
Fly 105 HDARYDEFSRKLVKLDLHGAKMKVLQSKCSTLENLAGICVMDTKNVLKLLGKDHRLRTIPKSECV 169
..:||:|.|.|||.:.|::|||.:...|.||.|.:.|::.||:.|:.:|:.|||...|
Zfish 125 -------IQQKLLKADFHGAILTVVRSKCPSYVGLTGILVQELKHIFKLITKEDKLKVIPKRNSV 182
Fly 170 FGMKVGNMEFTIFGQHLNIRPAERSVKKIK 199
|.::||.....|:|....:|.:|||.||.|
Zfish 183 FSVEVGGFVSHIYGSKFELRSSERSAKKFK 212
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pop4 | NP_648168.1 |
POP4 |
111..201 |
CDD:197780 |
36/89 (40%) |
pop4 | NP_001018585.1 |
UPF0086 |
127..209 |
CDD:280109 |
33/81 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170596525 |
Domainoid |
1 |
1.000 |
70 |
1.000 |
Domainoid score |
I9547 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H31392 |
Inparanoid |
1 |
1.050 |
103 |
1.000 |
Inparanoid score |
I4953 |
OMA |
1 |
1.010 |
- |
- |
|
QHG58710 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1362700at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004374 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto40703 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101654 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13348 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4755 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
13 | 12.910 |
|
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