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Protein Alignment Pop4 and pop4
DIOPT Version :9
Sequence 1: | NP_648168.1 |
Gene: | Pop4 / 38889 |
FlyBaseID: | FBgn0035831 |
Length: | 206 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001017252.1 |
Gene: | pop4 / 550006 |
XenbaseID: | XB-GENE-1009757 |
Length: | 219 |
Species: | Xenopus tropicalis |
Alignment Length: | 155 |
Identity: | 57/155 - (36%) |
Similarity: | 88/155 - (56%) |
Gaps: | 7/155 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 RKRRAHKSSTLSRREYAALGLNTLPTKQMKYEEALPLHHLWKGYVREHLELREGDEVPQVHDARY 109
:||:.:||..|:.:|...:.|..:..:|.:|:..||||.||:.|:|:.......|..||:
Frog 65 KKRKRNKSKILTAKERRDMRLFEIKPEQQRYQLFLPLHELWRQYIRDLCNGLRPDAQPQM----- 124
Fly 110 DEFSRKLVKLDLHGAKMKVLQSKCSTLENLAGICVMDTKNVLKLLGKDHRLRTIPKSECVFGMKV 174
...||:|.|||||.:.|.:|||.:...|.||.:.:||:|.|.:.||.:|:|:||..|||.:::
Frog 125 --IQNKLLKADLHGALLTVAKSKCPSYVGLQGIILQETKHVFKFITKDDKLKTVPKLNCVFSVEI 187
Fly 175 GNMEFTIFGQHLNIRPAERSVKKIK 199
......|:|....:|.:|||.||.|
Frog 188 DGFISYIYGSKFQMRSSERSAKKFK 212
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pop4 | NP_648168.1 |
POP4 |
111..201 |
CDD:197780 |
37/89 (42%) |
pop4 | NP_001017252.1 |
UPF0086 |
127..209 |
CDD:376634 |
34/81 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
74 |
1.000 |
Domainoid score |
I9018 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H31392 |
Inparanoid |
1 |
1.050 |
111 |
1.000 |
Inparanoid score |
I4735 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1362700at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004374 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto103461 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1167 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4755 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 8.090 |
|
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