DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8209 and CG8042

DIOPT Version :9

Sequence 1:NP_648167.1 Gene:CG8209 / 38888 FlyBaseID:FBgn0035830 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_648165.1 Gene:CG8042 / 38886 FlyBaseID:FBgn0027554 Length:656 Species:Drosophila melanogaster


Alignment Length:330 Identity:106/330 - (32%)
Similarity:156/330 - (47%) Gaps:39/330 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PRERVEYALEVTSNKGVEPAMEWLLAHVDDPIPSRQGAGESPGSTAQPAAAVDSSAAAASSSTSG 77
            |...||.|.....|..|..::..:.|.|.  ..|.:|...|....|.|.|......||| |...|
  Fly   175 PTGGVEEAKTNPPNSPVAASLASIPAAVS--TSSLEGKSGSEAEAASPTALAAEKRAAA-SKVEG 236

  Fly    78 AGETSAPVAKSLKCDECGKVLRDHTEVEYHAAKTGHTKFSESEEEKKALTEEEKKAQLALIEEKL 142
            :..||...|::...:.    |.....:...|......:..|:::.    ||.|::  ||.:...|
  Fly   237 SATTSGAAARNFATNN----LIPAVPLMTPAVPVPTQRPLEAQDN----TESEER--LAEVRNIL 291

  Fly   143 KQKRIEREEREKIEALQREKNRIKSGKDMTEAKRRMEELEMKKIVEQRKREKDEEKAARDRVKAQ 207
            :|||.||.|.||....:.|..|.:.|::....:.|.:|.|:|.:.||.|||:.||.|||:|::||
  Fly   292 EQKRKERVEEEKRMEKENELRRRRDGREAQSQQARAKEQELKNMQEQIKRERQEELAARERIRAQ 356

  Fly   208 IEADKAARKAREQKELGNAEPAPSVSSTT----------VSSPPAGVKSPPRDYTETRIQVRLQD 262
            |.||:|     ||.:..|   .|.:||||          |.:..|.|.|    ..|||:|:||..
  Fly   357 IAADRA-----EQAQRFN---TPDISSTTNSVAATAASNVITTDASVSS----VDETRLQIRLPG 409

  Fly   263 GSTLQETFNVKEQLSAVRVFIQMKTGIES---PFSLMTTFPRKLFAEDDYEKPLEVLGLVPSAVI 324
            |....::|...|.|:.|||:::.:....|   .|:|.|::||:.|..:|..|.|..|.|||:||:
  Fly   410 GIQRTKSFPAGEVLATVRVYVRNEMLAASDVRDFTLATSYPRREFQTEDEVKTLNELNLVPNAVV 474

  Fly   325 -TMTK 328
             .:||
  Fly   475 LVLTK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8209NP_648167.1 UBA_UBXN1 2..42 CDD:270487 8/28 (29%)
SAKS1_UBX 250..328 CDD:176367 29/81 (36%)
CG8042NP_648165.1 DUF3682 170..337 CDD:289231 46/174 (26%)
GBP_C <272..367 CDD:303769 41/105 (39%)
coiled coil 342..353 CDD:293879 6/10 (60%)
UBQ 399..476 CDD:294102 29/76 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470263
Domainoid 1 1.000 43 1.000 Domainoid score I4748
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.759104 Normalized mean entropy S3959
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2329
SonicParanoid 00.000 Not matched by this tool.
54.820

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