DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8209 and Ubxn1

DIOPT Version :10

Sequence 1:NP_648167.1 Gene:CG8209 / 38888 FlyBaseID:FBgn0035830 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001030001.2 Gene:Ubxn1 / 293719 RGDID:1309471 Length:297 Species:Rattus norvegicus


Alignment Length:342 Identity:124/342 - (36%)
Similarity:186/342 - (54%) Gaps:66/342 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEVQTLMDMGFPRERVEYALEVTSNKGVEPAMEWLLAHVDDP-------IPSRQGAGESPGSTA 58
            ::.:::|::|||||.|.|.||.:|.|:|:|.||:||:.|.|||       .|.....|..|    
  Rat     4 LTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLSHILGREP---- 64

  Fly    59 QPAAAVDSSAAAASSSTSGAGETSAPVAKSLKCDECGKVLRDHTEVEYHAAKTGHTKFSESEEEK 123
                 ..|.......|.|.|||:                                         |
  Rat    65 -----TPSEQVGPEGSGSAAGES-----------------------------------------K 83

  Fly   124 KALTEEEKKAQLALIEEKLKQKRIEREEREKIEALQREKNRIKSGKDMTEAKRRMEELEMKKIVE 188
            ..|||||::.|...:.|.:.||:.||||||:.|||:|||.|.:.|::::.|:::::|.|:::..|
  Rat    84 PVLTEEERQEQTKRMLELVAQKQREREEREEREALEREKQRRRQGQELSAARQKLQEDEIRRAAE 148

  Fly   189 QRKREKDEEKAARDRVKAQIEADKAARKAREQKELGNAEPAPSVSSTTVSSPPAGVKSPP--RDY 251
            :|:|||.||.|||.||:.:||.|||.|..:....:|:....|:.....|.|.|.  :.||  |:|
  Rat   149 ERRREKAEELAARQRVREKIERDKAERAQKYGGTVGSRSSPPATDPGPVPSSPR--QEPPTKREY 211

  Fly   252 TETRIQVRLQDGSTLQETFNVKEQLSAVRVFIQMKTGIE-----SPFSLMTTFPRKLFAEDDYEK 311
            .:.||||||.||::|.:||..:|||:|||:::::..|.|     .|..|::.|||:.|:|.|.|:
  Rat   212 DQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMER 276

  Fly   312 PLEVLGLVPSAVITMTK 328
            ||:.||||||||:.:.|
  Rat   277 PLQELGLVPSAVLIVAK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8209NP_648167.1 UBA_UBXN1 2..42 CDD:270487 19/39 (49%)
PTZ00121 <108..>229 CDD:173412 46/120 (38%)
UBX_UBXN1 248..327 CDD:340470 41/85 (48%)
Ubxn1NP_001030001.2 UBA_UBXN1 5..45 CDD:270487 19/39 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..212 68/225 (30%)
Interaction with BRCA1. /evidence=ECO:0000250 43..297 105/303 (35%)
UBX_UBXN1 208..292 CDD:340470 40/83 (48%)

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