DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8209 and Ubxn1

DIOPT Version :9

Sequence 1:NP_648167.1 Gene:CG8209 / 38888 FlyBaseID:FBgn0035830 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001030001.1 Gene:Ubxn1 / 293719 RGDID:1309471 Length:297 Species:Rattus norvegicus


Alignment Length:342 Identity:123/342 - (35%)
Similarity:184/342 - (53%) Gaps:66/342 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEVQTLMDMGFPRERVEYALEVTSNKGVEPAMEWLLAHVDDP-------IPSRQGAGESPGSTA 58
            ::.:::|::|||||.|.|.||.:|.|:|:|.||:||:.|.|||       .|.....|..|    
  Rat     4 LTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLSHILGREP---- 64

  Fly    59 QPAAAVDSSAAAASSSTSGAGETSAPVAKSLKCDECGKVLRDHTEVEYHAAKTGHTKFSESEEEK 123
                 ..|.......|.|.|||:                                         |
  Rat    65 -----TPSEQVGPEGSGSAAGES-----------------------------------------K 83

  Fly   124 KALTEEEKKAQLALIEEKLKQKRIEREEREKIEALQREKNRIKSGKDMTEAKRRMEELEMKKIVE 188
            ..|||||::.|...:.|.:.||:.||||||:.|||:|||.|.:..::::.|::|::|.|:::..|
  Rat    84 PVLTEEERQEQTKRMLELVAQKQREREEREEREALEREKQRRRQRQELSAARQRLQEDEIRRAAE 148

  Fly   189 QRKREKDEEKAARDRVKAQIEADKAARKAREQKELGNAEPAPSVSSTTVSSPPAGVKSPP--RDY 251
            :|:|||.||.|||.||:.:||.|||.|..:....:|:....|:.....|.|.|.  :.||  |:|
  Rat   149 ERRREKAEELAARQRVREKIERDKAERAQKYGGTVGSRSSPPATDPGPVPSSPR--QEPPTKREY 211

  Fly   252 TETRIQVRLQDGSTLQETFNVKEQLSAVRVFIQMKTGIE-----SPFSLMTTFPRKLFAEDDYEK 311
            .:.||||||.||::|..:|..:|||:|||:::::..|.|     .|..|::.|||:.|:|.|.|:
  Rat   212 DQCRIQVRLPDGTSLTLSFRAREQLAAVRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMER 276

  Fly   312 PLEVLGLVPSAVITMTK 328
            ||:.||||||||:.:.|
  Rat   277 PLQELGLVPSAVLVVAK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8209NP_648167.1 UBA_UBXN1 2..42 CDD:270487 19/39 (49%)
SAKS1_UBX 250..328 CDD:176367 38/82 (46%)
Ubxn1NP_001030001.1 UBA_UBXN1 5..45 CDD:270487 19/39 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..212 68/225 (30%)
Interaction with BRCA1. /evidence=ECO:0000250 43..297 104/303 (34%)
SAKS1_UBX 210..293 CDD:176367 38/82 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353765
Domainoid 1 1.000 99 1.000 Domainoid score I6960
eggNOG 1 0.900 - - E1_KOG2689
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9283
Inparanoid 1 1.050 205 1.000 Inparanoid score I3659
OMA 1 1.010 - - QHG52921
OrthoDB 1 1.010 - - D1297214at2759
OrthoFinder 1 1.000 - - FOG0003698
OrthoInspector 1 1.000 - - oto96110
orthoMCL 1 0.900 - - OOG6_104595
Panther 1 1.100 - - LDO PTHR46340
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4117
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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