DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8209 and si:ch73-173p19.1

DIOPT Version :9

Sequence 1:NP_648167.1 Gene:CG8209 / 38888 FlyBaseID:FBgn0035830 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_002660968.3 Gene:si:ch73-173p19.1 / 100332407 ZFINID:ZDB-GENE-130530-952 Length:918 Species:Danio rerio


Alignment Length:337 Identity:77/337 - (22%)
Similarity:132/337 - (39%) Gaps:94/337 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VQTLMDMGFPRERVEYALEVTSNKGVEPAMEWLLAHVDDPIPSRQGAGESPGSTAQPAAAVDSSA 68
            :.||.:|||..::::.|:: .....|..|.||||          ||.........||:..::::.
Zfish    11 ISTLTEMGFSHDQIQAAMQ-AGFFSVTEAAEWLL----------QGGSPRHKLVKQPSGPLETAF 64

  Fly    69 AA------ASSSTSGAGETSAPVAKSLKCDECGKVLRDHTEVEYHAAKTGHTKFSESEEEKKALT 127
            :|      |:||.:.:..|...:..:                                  ..::.
Zfish    65 SAFNPPKDAASSNNNSEATGPSLVLA----------------------------------PPSVN 95

  Fly   128 EEEKKAQLALIEEKLKQKR--IEREEREKIEALQREKNRIKSGKDMTEAKRRMEELEMKKIVEQR 190
            .:..|.||.| |.::||.:  ...::|:|:....|.:.|         .|::..||.:|:|.|.|
Zfish    96 AQTTKEQLPL-ETRIKQDKSNFHEQQRQKVAQEARAERR---------QKKQERELVLKRIAEDR 150

  Fly   191 KREKDEEKAARDRVKAQIE--ADKAARKAREQKELGNAEPAPSVSSTTVSSPPAGVKSPPRDYTE 253
            :.:::         |||.|  ||.:...|:.|:..|..|  .||.:..:                
Zfish   151 RSQQE---------KAQTEATADTSPSSAQGQRLGGRVE--TSVDNHCI---------------- 188

  Fly   254 TRIQVRLQDGSTLQETFNVKEQLSAVRVFIQMKTGIESPFSLMTTFPRKLFAEDDYEKPLEVLGL 318
              :.:||..|.:::|.|.....||.|..:|..:......|||:..||||.|.|.:....|..|||
Zfish   189 --LMIRLPSGESMRERFPADTPLSQVVEYIASRHPSLPAFSLLQGFPRKRFGETELTCSLRSLGL 251

  Fly   319 VPSAVITMTKTP 330
            .|:|.:.:..||
Zfish   252 TPNAALCIQTTP 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8209NP_648167.1 UBA_UBXN1 2..42 CDD:270487 12/37 (32%)
SAKS1_UBX 250..328 CDD:176367 24/77 (31%)
si:ch73-173p19.1XP_002660968.3 UBA_like_SF 6..43 CDD:304366 10/32 (31%)
Nop25 116..>169 CDD:286843 17/70 (24%)
UBQ 187..260 CDD:294102 24/90 (27%)
AMN1 523..701 CDD:187754
LRR <524..710 CDD:227223
leucine-rich repeat 545..569 CDD:275381
leucine-rich repeat 570..594 CDD:275381
leucine-rich repeat 595..620 CDD:275381
leucine-rich repeat 621..645 CDD:275381
leucine-rich repeat 646..691 CDD:275381
leucine-rich repeat 692..766 CDD:275381
leucine-rich repeat 717..742 CDD:275381
AMN1 750..>888 CDD:187754
leucine-rich repeat 767..790 CDD:275381
leucine-rich repeat 791..815 CDD:275381
leucine-rich repeat 816..840 CDD:275381
leucine-rich repeat 841..863 CDD:275381
leucine-rich repeat 864..888 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2329
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.800

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