DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8042 and UBX6

DIOPT Version :9

Sequence 1:NP_648165.1 Gene:CG8042 / 38886 FlyBaseID:FBgn0027554 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_012487.1 Gene:UBX6 / 853399 SGDID:S000003584 Length:396 Species:Saccharomyces cerevisiae


Alignment Length:388 Identity:81/388 - (20%)
Similarity:131/388 - (33%) Gaps:107/388 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 TSGAAARNFATNNLIPAVPLMTPAVPVPTQRPLEAQDNTESEER--LAEVRNILEQKRKERVEEE 302
            :|.|.:.|...|.|:..                ..|.|:.|.|:  .....|.|:...|.:|.:.
Yeast    79 SSSAPSINILQNGLLEC----------------SIQGNSLSREQDPWETFINGLQSVFKGQVTKR 127

  Fly   303 KRMEKENELRRRRDGREAQSQQARAKEQELKNMQEQIKRERQEELAARERIRAQIAADRAEQAQR 367
            |...|.||                 :.|.:|.|.:..|.||:...        |...|...:.|:
Yeast   128 KLFSKSNE-----------------EYQRVKRMIQNDKLERKYVF--------QNTNDPQRKPQK 167

  Fly   368 FNTPDISSTTN--SVAATAASNVITTDASVSSVDETRLQIRLPGGIQRTKSFPAGEVLATVRVYV 430
            :....::...:  |.....|.|..|            ||::||.|...:.:||....|..||:::
Yeast   168 WKQLTVTDNVSYKSQKGFLAQNYCT------------LQLKLPNGYTISNTFPPQTKLHKVRMWL 220

  Fly   431 RNEMLAASDVRDFTLATSYPRREFQTEDEVKTLNELNLVPNAVVLVLTKEQVNRVVQSGGSLMTM 495
              :.....|...:....:.||......||:|:|.||:|:|.:.:::...|..|            
Yeast   221 --DYNCYDDGTPYLFHRNIPRVTLTRNDELKSLQELDLLPRSTLILEPLEANN------------ 271

  Fly   496 LGTVIWALLTPAAKAFDYINKMG-LRPLTQKLSVFMA--------NFRWPGQRAGLEVYQGDAAA 551
                         |.|||:.:.. |..:...|:.|.|        :.|...||.|..|       
Yeast   272 -------------KTFDYMEQSSLLHKVYSGLTSFWAKEPEVDASSSRLGYQRLGTNV------- 316

  Fly   552 RRNMDMFSLRPTPAPGYEYDGASTEQTGGSAERP----TPQNQPGPGNTPPAHNTSQASASQS 610
             .|...:||:...:.....||..  ..||.:..|    ||:..|..|.:....|.|:.:.|.:
Yeast   317 -SNSANYSLQKLSSLDMVSDGGG--GGGGDSMTPSAYTTPRMYPSNGTSQLRQNVSELNLSSN 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8042NP_648165.1 DUF3682 170..337 CDD:289231 20/98 (20%)
GBP_C <272..367 CDD:303769 20/96 (21%)
coiled coil 342..353 CDD:293879 2/10 (20%)
UBQ 399..476 CDD:294102 21/76 (28%)
UBX6NP_012487.1 UBX 190..266 CDD:197552 22/89 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.759104 Normalized mean entropy S3959
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105479
Panther 1 1.100 - - O PTHR46424
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2329
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.890

Return to query results.
Submit another query.