DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8042 and ubxn4

DIOPT Version :9

Sequence 1:NP_648165.1 Gene:CG8042 / 38886 FlyBaseID:FBgn0027554 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_998206.1 Gene:ubxn4 / 406314 ZFINID:ZDB-GENE-040426-1981 Length:500 Species:Danio rerio


Alignment Length:669 Identity:180/669 - (26%)
Similarity:279/669 - (41%) Gaps:184/669 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNWHKGNIAEAVAASKAKGAVFVVFIEGQDEMTRKLERFVDDSQVRSRLETSDFVAIKVQGNSSA 65
            |.|.:|:|..|:|.:|.:.:||||.|.|.|:.:|:|....:.:.| |.:..:..|||.|...|..
Zfish     1 MRWFEGSIPAAIATAKQRKSVFVVVITGSDDQSRQLMSSWETAGV-SEVAQNSCVAIHVDAQSET 64

  Fly    66 YGQFMSLYKIVPIPSLFFIGKTGTPLEIATGVTASVDELTEKIDKVLILAGKRTEPVAASSSSCA 130
            ..||..:|.:|.:||.||||:.|.|||:..| :.:.|||..:|.:|:.:.|::|:          
Zfish    65 CVQFSQIYPVVCVPSSFFIGENGIPLEVIAG-SVTEDELKRRISRVIQMQGQQTD---------- 118

  Fly   131 KTLDPNEVRSFAGADGSSSTGESQVVQTASENFRDPETTSVSNSPTGGVEEAKTNPPNSPVAASL 195
                        .|:..:.|.|...|....|..   .|||.|                       
Zfish   119 ------------AAEMHTQTAEQPAVSKPQEAL---NTTSSS----------------------- 145

  Fly   196 ASIPAAVSTSSLE-----GKSGSEAEAASPTALAAEKRAAASKVEGSATTSGAAARNFATNNLIP 255
                ||.|..||.     |.||:|          .|.:..|.|.|                    
Zfish   146 ----AATSKESLSVRTEGGASGAE----------VEPKVEAEKAE-------------------- 176

  Fly   256 AVPLMTPAVPVPTQRPLEAQDNTESEERLAEVRNILEQKR--KERVEEEKRMEKENELRRRRDGR 318
                         ::|.|..|  ...|||.:.   ||::|  |::.|:||.::|  |:.||:.|:
Zfish   177 -------------EQPGEGLD--VKVERLTKK---LEERREQKKKAEDEKEIQK--EVDRRKLGK 221

  Fly   319 EAQSQQARAKEQELKNMQEQIKRERQEELAARERIRAQIAADRAEQAQRF--NTPDI-SSTTNSV 380
            |....:.:.:|::.:.:.|:..||:.||.|||||::.|||.|||::|.|:  |..:: ::...::
Zfish   222 EMLEYKKQQEEEKTRRLLEERNREKMEERAARERVKQQIALDRADRAARYAQNQQEVEAARVAAL 286

  Fly   381 AATAASNVITTDASV---SSVDETRLQIRLPGGIQRTKSFPAGEVLATVRVYVRNEMLAASDVRD 442
            .|.||......||:.   |:|  .|:|.|||.|...|..||:...|...|.:...|:  .:....
Zfish   287 QARAAEQEAKRDATQRERSAV--ARIQFRLPDGSSFTNQFPSETRLQEARQFAVQEV--GNRYGQ 347

  Fly   443 FTLATSYPRREFQTEDEVKTLNELNLVPNAVVLVLTK-EQVNRVVQSGGSLMTMLGTVIWALLTP 506
            |||||.:|||||..||..::|.||.|.|:|.:::|.: ......|....|..:.:.:|..:||.|
Zfish   348 FTLATMFPRREFTDEDLQRSLLELELTPSASIVLLPQWSGAGAAVVRSSSSSSSVWSVFSSLLFP 412

  Fly   507 AAKAFDYINKMGLRPLTQKLSVFMANFRWPGQRAGLEVYQGDAAARRNMDMFSLRPTPAPGYEYD 571
            ....:.:|:.:                                       :||...|..|     
Zfish   413 LLAVWRFISAL---------------------------------------LFSPTQTHTP----- 433

  Fly   572 GASTEQTGGSAERPTPQNQPGPGNTPPAHNTSQASASQSQQFQQRPGGYQPPKYGDSNIRRLQDT 636
                  ..|:..|..|....|....|      |..|.:.:..::||..::.    |..|.||: |
Zfish   434 ------AAGTHTRAFPPAATGSSTDP------QRDAVRKRVLEKRPEDFKK----DGKIYRLR-T 481

  Fly   637 KKDEKDKDKATYNGNSTQQ 655
            .:|.:| |..|:|||||||
Zfish   482 PEDSED-DNNTWNGNSTQQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8042NP_648165.1 DUF3682 170..337 CDD:289231 35/173 (20%)
GBP_C <272..367 CDD:303769 36/96 (38%)
coiled coil 342..353 CDD:293879 7/10 (70%)
UBQ 399..476 CDD:294102 30/76 (39%)
ubxn4NP_998206.1 Neuromodulin_N <100..>309 CDD:331332 75/312 (24%)
UBX 307..383 CDD:197552 31/79 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1334491at2759
OrthoFinder 1 1.000 - - FOG0007457
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105479
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6332
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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