DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8042 and Ubxn4

DIOPT Version :9

Sequence 1:NP_648165.1 Gene:CG8042 / 38886 FlyBaseID:FBgn0027554 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_006249761.1 Gene:Ubxn4 / 304766 RGDID:1307451 Length:507 Species:Rattus norvegicus


Alignment Length:680 Identity:193/680 - (28%)
Similarity:283/680 - (41%) Gaps:199/680 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNWHKGNIAEAVAASKAKGAVFVVFIEGQDEMTRKLERFVDDSQVRSRLETSDFVAIKVQGNSSA 65
            |.|.:|.|..|:|::|..|||||||:.|.||.:.::....:|.:|| ...:.:|||||:...|.|
  Rat     1 MLWFQGAIPAAIASAKRSGAVFVVFVAGDDEQSTQMAASWEDEKVR-EASSDNFVAIKIDTKSEA 64

  Fly    66 YGQFMSLYKIVPIPSLFFIGKTGTPLEIATGVTASVDELTEKIDKVLILAGKRTEPVAASSSSCA 130
            ..||..:|.:|.:||.||||.:|.|||:..| :.|.|||..:|.||..:...:.|          
  Rat    65 CLQFSQIYPVVCVPSSFFIGDSGIPLEVIAG-SVSADELVTRIHKVQQMHSLKGE---------- 118

  Fly   131 KTLDPNEVRSFAGADGSSSTGESQVVQTASENFRDPETTSVSNSPTGGVEEAKTNPPNSPVAASL 195
             |...|:.:|.:.....|::.|..:.::|     :...|.:..:||       |:.|.|..||. 
  Rat   119 -TSVTNDKQSESSVSTPSASFEPDICESA-----ESRNTELCETPT-------TSDPKSDTAAG- 169

  Fly   196 ASIPAAVSTSSLEGKSGSEAEAASPTALAAEKRAAASKVEGSATTSGAAARNFATNNLIPAVPLM 260
                               .|.|...:|:.|....::                            
  Rat   170 -------------------GECAGHDSLSQEPPGCSN---------------------------- 187

  Fly   261 TPAVPVPTQRPLEAQDNT-ESEERLAEVRNILEQKRKERVEEEKRMEKENELRRRRDGREAQSQQ 324
                    |||  |:|.| ..|.||.:.   ||::|:|:.:||.:.|.:.|:.||:.|:|....:
  Rat   188 --------QRP--AEDLTVRVESRLTKK---LEERREEKRKEEAQREIKKEIERRKTGKEMLDYK 239

  Fly   325 ARAKEQELKNMQEQIKRERQEELAARERIRAQIAADRAEQAQRFNTPDISSTTNSVAATAASNVI 389
            .:.:|:..|.|.|:..||:.|:.||||||:.|||.||||:|.||     :.|..:.||.||:.:.
  Rat   240 RKQEEELTKRMLEERSREKAEDRAARERIKQQIALDRAERAARF-----AKTKEAEAAKAAALLA 299

  Fly   390 -TTDASVSSVDET-------RLQIRLPGGIQRTKSFPAGEVLATVRVYVRNEMLAASDVRDFTLA 446
             ..:|.|.....|       |:|.|||.|...|..||:...|...|.:....:  .:...:|:||
  Rat   300 KQAEAEVKRESSTRDRSTIARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTV--GNTYGNFSLA 362

  Fly   447 TSYPRREFQTEDEVKTLNELNLVPNAVVLVLT--KEQVNRVVQSGGSLMTMLGTV------IWAL 503
            |.:|||||..||..:.|.:|.|.|:|.|::|.  :...:.|..|.|.:.|:||||      ||.|
  Rat   363 TMFPRREFTREDYKRKLLDLELAPSASVVLLPAGRPATSIVPSSSGDIWTLLGTVLYPFLAIWRL 427

  Fly   504 LTPAAKAFDYINKMGLRPLTQKLSVFMANFRWPGQRAGLEVYQGDAAARRNMDMFSLRPTPAPGY 568
            :                          :||                       :|| .|.||   
  Rat   428 I--------------------------SNF-----------------------LFS-NPPPA--- 439

  Fly   569 EYDGASTEQTGGSAERPTPQNQPGPGNTPPAHNTSQASASQSQQFQQRP--------GGYQPPKY 625
                    ||...|....|.|                |||.|:..::.|        .|....|.
  Rat   440 --------QTSARATSTEPSN----------------SASSSKSEKREPVRKRVLEKRGEDFKKE 480

  Fly   626 GDSNIRRLQDTKKDEKDKDKATYNGNSTQQ 655
            |.....|.||..:||.:    |:|||||||
  Rat   481 GKIYRLRTQDDGEDENN----TWNGNSTQQ 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8042NP_648165.1 DUF3682 170..337 CDD:289231 35/167 (21%)
GBP_C <272..367 CDD:303769 39/95 (41%)
coiled coil 342..353 CDD:293879 6/10 (60%)
UBQ 399..476 CDD:294102 29/83 (35%)
Ubxn4XP_006249761.1 Thioredoxin_like 4..113 CDD:294274 47/110 (43%)
UBX 319..394 CDD:197552 28/76 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5368
eggNOG 1 0.900 - - E1_KOG2507
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 221 1.000 Inparanoid score I3461
OMA 1 1.010 - - QHG60095
OrthoDB 1 1.010 - - D1334491at2759
OrthoFinder 1 1.000 - - FOG0007457
OrthoInspector 1 1.000 - - oto96883
orthoMCL 1 0.900 - - OOG6_105479
Panther 1 1.100 - - LDO PTHR46424
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6332
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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