DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8042 and ubxn-4

DIOPT Version :9

Sequence 1:NP_648165.1 Gene:CG8042 / 38886 FlyBaseID:FBgn0027554 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_001370812.1 Gene:ubxn-4 / 176187 WormBaseID:WBGene00022703 Length:469 Species:Caenorhabditis elegans


Alignment Length:672 Identity:146/672 - (21%)
Similarity:248/672 - (36%) Gaps:223/672 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNWHKGNIAEAVAASKAKGAVFVVFIEGQDEMTRKLERF---VDDSQVRSRLETSDFVAIKVQGN 62
            |.|..||:|.|:..|:...|:.:|:|....|..:..:.|   :|.|.:...:     |.||::..
 Worm     1 MQWFGGNVATAIQISRKNKALLIVYITTDSEDGQIFDGFWQHIDSSNLLCAV-----VGIKLKAG 60

  Fly    63 SSAYGQFMSLYKIVPIPSLFFIGKTGTPLEIATG-VTASVDELTEKIDKVLILAGKRTEPVAASS 126
            .::..||..:|....:|:.:.|.:.|.|||:.|. |..:.|:...|.||                
 Worm    61 ETSAQQFADIYPTPILPAAYLIDQNGKPLEVITPLVGKTYDQFRAKFDK---------------- 109

  Fly   127 SSCAKTLDPNEVRSFAGADGSSSTGESQVVQTASENFRDPETTSVSNSPTGGVEEAKT-NPPNSP 190
                                            |:..|       |:..||....:..| :|..:|
 Worm   110 --------------------------------ATAQF-------VNGMPTAAANQLSTPSPSPAP 135

  Fly   191 VAASLASIPAAVSTSSLEGKSGSEAEAASPTALAAEKRAAASKVEGSATTSGAAARNFATNNLIP 255
            |     .:||:...                                                   
 Worm   136 V-----QVPASTDA--------------------------------------------------- 144

  Fly   256 AVPLMTPAVPVPTQRPLEAQDNT-ESEERLAEVRNILEQKRKERVEEEKRMEK--ENELRRRRDG 317
            .:|..|| |..|.|....:|:.| |..|::|..:.:||||:::..|:::..:|  :.|:.:.|:.
 Worm   145 PIPAPTP-VTAPIQSSSTSQEMTRELAEKVARAKALLEQKKQKDAEKKREADKHVKEEMTKAREA 208

  Fly   318 REAQSQQARAKEQELKNMQEQIKRERQEELAA---RERIRAQIAADRAEQAQRF----NTPDISS 375
            ::.:..:|..|         ..|:.:.|:|||   ::||.|||.|||....::|    ||.:.|.
 Worm   209 KQERDAEALVK---------AAKQRKMEKLAAESDKKRILAQIKADREAAQKKFGKLVNTENASE 264

  Fly   376 TTNSVAATAASNVITTDASVSSVDETRLQIRLPGGIQRTKSFPAGEVLATVRVYVRNEMLAASDV 440
            .|.....|.....:.:       |..|||:|||.|....:.||:.:||.::...:|.:...|...
 Worm   265 NTEKKQETTVGKAVPS-------DRCRLQVRLPDGSTFVEEFPSNDVLNSLVEIIRQKPSIAGTT 322

  Fly   441 RDFTLATSYPRREFQTEDEVKTLNELNLVPNAVVLVLTKEQVNRVVQSGGSLMTM-LGTVIWALL 504
              |.:...||||.|..:|..||..|..|.|:..::|:.|...:.......||.|. :..|.|.|.
 Worm   323 --FEIQQPYPRRIFTNDDYSKTFLENQLTPSTALVVIQKSSGSSSNYGSFSLSTQTVSFVTWVLY 385

  Fly   505 TPAAKAFDYINKMGLRPLTQKLSVFMANFRW--PGQRAGLEVYQGDAAARRNMDMFSLRPTPAPG 567
                            |||...::|.....|  .|:       |.|:.:::|             
 Worm   386 ----------------PLTAFWNIFCGMIGWNSTGK-------QQDSKSKKN------------- 414

  Fly   568 YEYDGASTEQTGGSAERPTPQNQPGPGNTPPAHNTSQASASQSQQFQQRPGGYQPPKYGDSNIRR 632
               ||.||  :|.|..:|..:..|                 :|.:.::|           .|:..
 Worm   415 ---DGPST--SGQSGSQPQRRGMP-----------------RSAEVRRR-----------GNVAG 446

  Fly   633 LQDTKKDEKDKDKATYNGNSTQ 654
            |::..:|:.: ::|::||||||
 Worm   447 LENPNEDDPE-ERASFNGNSTQ 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8042NP_648165.1 DUF3682 170..337 CDD:289231 30/170 (18%)
GBP_C <272..367 CDD:303769 28/100 (28%)
coiled coil 342..353 CDD:293879 4/13 (31%)
UBQ 399..476 CDD:294102 26/76 (34%)
ubxn-4NP_001370812.1 PRK05641 85..>159 CDD:235540 27/185 (15%)
tolA_full <167..>252 CDD:274303 26/93 (28%)
UBX_UBXN4 282..358 CDD:340534 26/77 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4138
eggNOG 1 0.900 - - E1_KOG2507
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I2949
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60095
OrthoDB 1 1.010 - - D1334491at2759
OrthoFinder 1 1.000 - - FOG0007457
OrthoInspector 1 1.000 - - oto20277
orthoMCL 1 0.900 - - OOG6_105479
Panther 1 1.100 - - LDO PTHR46424
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2329
SonicParanoid 1 1.000 - - X6332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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