DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8042 and ubxn4

DIOPT Version :9

Sequence 1:NP_648165.1 Gene:CG8042 / 38886 FlyBaseID:FBgn0027554 Length:656 Species:Drosophila melanogaster
Sequence 2:XP_002933995.1 Gene:ubxn4 / 100497835 XenbaseID:XB-GENE-984269 Length:516 Species:Xenopus tropicalis


Alignment Length:687 Identity:183/687 - (26%)
Similarity:284/687 - (41%) Gaps:204/687 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNWHKGNIAEAVAASKAKGAVFVVFIEGQDEMT-RKLERFVDDSQVRSRLETSDFVAIKVQGNSS 64
            |.|.:|:|.||:||:|.:.:|||||:.|:||.: |..|.:.::...::..|  .|||||:...|.
 Frog     1 MLWFQGSIPEAIAAAKQRNSVFVVFVAGEDEQSIRMSESWANEGVTQNTSE--GFVAIKLDSQSE 63

  Fly    65 AYGQFMSLYKIVPIPSLFFIGKTGTPLEIATGVTASVDELTEKIDKV----------LILAGKRT 119
            :..||..:|.:|.:||.||||:.|.|||:..| :.|.:||..||.||          |::..|..
 Frog    64 SCLQFSQIYPVVCVPSSFFIGENGIPLEVIAG-SISAEELVAKIAKVKQMHSGKKDGLLVNAKLP 127

  Fly   120 EPVAASSSSCAKTLDPNEVRSFAGADGSSSTGESQVVQTASENFRDPETTSVSNSPTGGVEEAKT 184
            |   :|...|::...|....:.|....::....:|           |||    :|||       |
 Frog   128 E---SSPEPCSEAPCPVVPHTHASPPENAQPAGTQ-----------PET----SSPT-------T 167

  Fly   185 NPPNSPVAASLASIPAAVSTSSLEGKSGSEAEAASPTALAAEKRAAASKVEGSATTSGAAARNFA 249
            .||     .|:|::|.|..:.|.|                                         
 Frog   168 EPP-----TSVAALPPAHESESQE----------------------------------------- 186

  Fly   250 TNNLIPAVPLMTPAVPVPTQRPLEAQDNTESEERLAEVRNILEQKRKERVEEEKRMEKENELRRR 314
                 |....:.|..|           ..|..:|:..|...||::|::|.::|:::|.:.|:.||
 Frog   187 -----PGTECVQPIQP-----------EEEFADRVQRVTQKLEERREQRKKDEEQVEIKKEIERR 235

  Fly   315 RDGREAQSQQARAKEQELKNMQEQIKRERQEELAARERIRAQIAADRAEQAQRFNTPDISSTTNS 379
            :.|::....:.:.:|...|...|:..||:.||.|||:|||.|||.|||::|.||     :.....
 Frog   236 KMGKDMLEYKRKQEEDLAKRALEERNREKAEEKAARDRIRQQIAQDRADRAARF-----AKNKEE 295

  Fly   380 VAATAASNVITTDASVSSVDE---------TRLQIRLPGGIQRTKSFPAGEVLATVRVYVRNEML 435
            :.|..|:.:....|...:..|         .|:|.|||.|...|..|.:...|...|.:....: 
 Frog   296 LEAAKAAELQAQQAEREARREVAQKERSTIARIQFRLPDGSSFTNQFASEAPLEEARQFAAQTV- 359

  Fly   436 AASDVRDFTLATSYPRREFQTEDEVKTLNELNLVPNA-VVLVLTKEQVNRVVQSG-GSLMTMLGT 498
             .:...:|.|||.:|||||..||..|:|..|.|.|:| :||:......|.|:||. |.:...|||
 Frog   360 -GNTYGNFALATMFPRREFTKEDYGKSLLSLELAPSASIVLLPAGRPSNAVIQSSEGGVWGFLGT 423

  Fly   499 VIWALLTPAAKAFDYINKMGLRPLTQKLSVFMANFRWPGQRAGLEVYQGDAAARRNMDMFSLRPT 563
            |::.||.                    :..|::||                          |..:
 Frog   424 VLFPLLA--------------------VWRFLSNF--------------------------LFGS 442

  Fly   564 PAPGYEYDGASTEQTGGSAERPTPQNQPGPGNTPPAHNTSQASASQSQQ----------FQQRPG 618
            |:|..            .||||          ..|.|.::..:||.|.:          .::|..
 Frog   443 PSPSQ------------PAERP----------AHPRHESTNPTASSSSEPKRDVVRKRVLEKRTD 485

  Fly   619 GYQPPKYGDSNIRRLQDTKKDEKDKDKATYNGNSTQQ 655
            .::.    :..|.||: |:.||.:.:  |:|||||||
 Frog   486 EFKK----EGKIYRLR-TQDDEDENN--TWNGNSTQQ 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8042NP_648165.1 DUF3682 170..337 CDD:289231 30/166 (18%)
GBP_C <272..367 CDD:303769 33/94 (35%)
coiled coil 342..353 CDD:293879 6/10 (60%)
UBQ 399..476 CDD:294102 29/86 (34%)
ubxn4XP_002933995.1 Thioredoxin_like 4..106 CDD:381987 42/104 (40%)
PLN02983 <133..>191 CDD:215533 20/130 (15%)
PTZ00121 <179..367 CDD:173412 55/251 (22%)
UBX_UBXN4 325..401 CDD:340534 29/77 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5289
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I3997
OMA 1 1.010 - - QHG60095
OrthoDB 1 1.010 - - D1334491at2759
OrthoFinder 1 1.000 - - FOG0007457
OrthoInspector 1 1.000 - - oto103577
Panther 1 1.100 - - LDO PTHR46424
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2329
SonicParanoid 1 1.000 - - X6332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.110

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