DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exex and Dfd

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:567 Identity:122/567 - (21%)
Similarity:180/567 - (31%) Gaps:221/567 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LTASSSTSMPSQLLLSHIQHHSSSLHHQRSHQRSSPPAQDYDQGSNQSTLSPRSQITPSPPAASP 79
            :|....:..|:.::..::.||.:...|..||..|.|     ...||               :|..
  Fly    73 MTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLP-----HHHSN---------------SAIS 117

  Fly    80 THSAATTGSPVSTYTPALSPGGAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHPPPPHPRLYVE 144
            .|..|:.|...|.|..|..|                            ..|||||          
  Fly   118 GHHQASAGGYSSNYANATPP----------------------------SHPHSHP---------- 144

  Fly   145 GFPPPHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQ-PAAN--HLSHSGATMAT 206
                  |. |||.:||.|        :...|..:.:||....|.:.. ||||  :.|:.|....:
  Fly   145 ------HA-HPHQSLGYY--------VHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGS 194

  Fly   207 TTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYARDQAELNHAFVTASNAAAA 271
            ..:|                                                       ...|..
  Fly   195 GAVL-------------------------------------------------------GGGAVG 204

  Fly   272 AQA----------AASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCE 326
            ..|          ..:|.|.:....:......|:..|.|..  .|.:|.||::......:....|
  Fly   205 GSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQ--CSSTEPPTNTALGLQELGLKLE 267

  Fly   327 ---DQQQPHGALHPQHLSMRM---------SDFHDEFKKPI---PPHSPIRPQDFPLYAGGHPYQ 376
               ::..|.|. ..|.|.||:         .|..:|.:..:   |........|..|........
  Fly   268 KRIEEAVPAGQ-QLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDED 331

  Fly   377 LLAQGGSAFHRPLDPSGKPIPIP--MGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKT 439
            |:|:.... .|.:.|..|.|.:.  ...::.|           ||                  :.
  Fly   332 LMAETTDG-ERIIYPWMKKIHVAGVANGSYQP-----------GM------------------EP 366

  Fly   440 RRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKR-------- 496
            :|.|||:|..|:|||||:|..|:||:|.:|.|:|..|:|||.|:||||||||||||:        
  Fly   367 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTK 431

  Fly   497 --------------------SKKAQQEAKERAKANQQQQQQ--QQTP 521
                                :|:|..:.:::|:..||.|||  ||||
  Fly   432 NVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTP 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 33/52 (63%)
DfdNP_477201.1 Homeobox 370..422 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.820

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