DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and pb

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:81 Identity:45/81 - (55%)
Similarity:57/81 - (70%) Gaps:3/81 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 GKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKR---SK 498
            |..||.|||:|:.|||||||:|..||||.||:|.|:|:.|.|:|.|||:||||||||.||   ||
  Fly   196 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSK 260

  Fly   499 KAQQEAKERAKANQQQ 514
            ...::.|:..|.:..|
  Fly   261 TDDEDNKDSLKGDDDQ 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 37/55 (67%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 37/55 (67%)

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