DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exex and lab

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:643 Identity:144/643 - (22%)
Similarity:209/643 - (32%) Gaps:222/643 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ASSSTSMPSQLLLSHIQHHSSSLHHQRSHQRSSPPAQDYDQGSNQSTLSPRSQITPSPPAASPTH 81
            |::|:....|....|:|     |..|:.||....|.|.......:|:         ||....|..
  Fly    33 ANASSYFAPQQHQPHLQ-----LQQQQQHQHLQQPQQHLTYNGYESS---------SPGNYYPQQ 83

  Fly    82 SAATTGSPVSTYTPALSPGGAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHPPPPHPRLYVEGF 146
            .|..|..|.|::..      .|...|.:..|..|:            .||||       |:    
  Fly    84 QAQLTPPPTSSHQV------VQQHQQQQQAQQQQL------------YPHSH-------LF---- 119

  Fly   147 PPPHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATTTLLP 211
                     .|:...|   .:........||.|...::..|......::.:....||.|..|:.|
  Fly   120 ---------SPSAAEY---GITTSTTTGNPGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAP 172

  Fly   212 PAQSQPKKSFCIDA--LLAKSQHQSGEPQPIIVDDRLAALH------YARDQAELN-HAFVTASN 267
            |:.|.|     |.|  ..|.|..|..:.|..|:......::      |...||:.. |.:.....
  Fly   173 PSNSSP-----ITAANASATSNTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAPVHGYAGQIE 232

  Fly   268 AAAAAQAAASAAGG--ISEQEAL-------------QRIRDSREYDSPSPDGM------------ 305
            ...||...||.|.|  :.:|:.:             |.:..|...|:....||            
  Fly   233 EKYAAVLHASYAPGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGH 297

  Fly   306 --SRSESPTSSHRSSPPISPGCEDQQQPH-GALHPQHLSMRMSDFHDEFKKPIPPH--------- 358
              :.:.:|   |:..|.:.   :.||||| ...|||:.|......|.:  ..:.|:         
  Fly   298 LGNLANNP---HQQQPQVQ---QQQQQPHQQPQHPQNQSPAAHQQHHQ--NSVSPNGGMNRQQRG 354

  Fly   359 ---------------------------SPIRPQDFPLY----------------------AGGHP 374
                                       ||......|.|                      |..|.
  Fly   355 GVISPGSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHD 419

  Fly   375 YQL-----LAQGGSAFHRPLDPSGKPI---PIPMGHNFMP----------SQLQFEFLARAGMLH 421
            ||:     :.:||..       .|..:   |:.:|.|..|          |.:.....|.||   
  Fly   420 YQMNGQLDMCRGGGG-------GGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAG--- 474

  Fly   422 HRIPELAAYPHHAILG---------------KTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFE 471
                  :|:|:...:|               .....||.||::||.||||:|..|:||:|.:|.|
  Fly   475 ------SAHPNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIE 533

  Fly   472 VASGLMLSETQVKIWFQNRRMKWKRSKK--------AQQEAKERAKANQQQQQQQQTP 521
            :|:.|.|:||||||||||||||.|:..|        ..|.:.........||||.|.|
  Fly   534 IANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPP 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 34/52 (65%)
labNP_476613.1 Homeobox 505..557 CDD:278475 34/51 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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