DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and hoxb9

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_988879.1 Gene:hoxb9 / 394474 XenbaseID:XB-GENE-963094 Length:247 Species:Xenopus tropicalis


Alignment Length:271 Identity:74/271 - (27%)
Similarity:99/271 - (36%) Gaps:94/271 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 EQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMRMSDFH 348
            |.|.....:.|.:|.||.|       :..|:| |.|...|.|..|.                   
 Frog    19 ESEEAPAAKFSGQYPSPRP-------AAHSAH-SEPLDFPSCSFQP------------------- 56

  Fly   349 DEFKKPI--PPHSPIRPQD-FPLYAGGHPYQLLAQG-----GSAFHRPLDP-------------S 392
               |.|:  ...||:.|.. .||.:..|||  :.||     |......|:|             .
 Frog    57 ---KAPVFSASWSPLNPHPASPLPSVYHPY--IQQGAPTPEGRYLRGWLEPLQRAENGPGQGTVK 116

  Fly   393 GKPIPIPMGHNFMPSQLQFEFLARAGMLHHRI---------PELAAYPHHAI------------- 435
            .:|:..|.|.           |.:.|...:.:         .|.|.:|.:.:             
 Frog   117 SEPLLGPPGE-----------LDKLGAQQYNLGSPAAREDANERATFPDNKLCEGSGDKDRTHQS 170

  Fly   436 --------LGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRM 492
                    ...:|:.|..:|..|.|||||:|..|.||:|.:|.|||..|.|||.|||||||||||
 Frog   171 NPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRM 235

  Fly   493 KWKRSKKAQQE 503
            |.|:..|.|.:
 Frog   236 KMKKLNKDQSK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 34/55 (62%)
hoxb9NP_988879.1 Hox9_act 1..169 CDD:461369 37/192 (19%)
Homeodomain 183..239 CDD:459649 34/55 (62%)

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