DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and Awh

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster


Alignment Length:95 Identity:28/95 - (29%)
Similarity:42/95 - (44%) Gaps:11/95 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 KTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWK------R 496
            ||:|.||.||.:||..|:..|:.:..........:||...||:...::||||.|.:.|      :
  Fly   147 KTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKKHIHAGK 211

  Fly   497 SKKAQQEAKERAKANQQQ-----QQQQQTP 521
            :|..:.|....|:....|     |...|.|
  Fly   212 NKIREPEGSSFARHINLQLTYSFQNNAQNP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 19/61 (31%)
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 18/55 (33%)
Blue background indicates that the domain is not in the aligned region.

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