DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and HOXD1

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens


Alignment Length:421 Identity:101/421 - (23%)
Similarity:145/421 - (34%) Gaps:152/421 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 YTPALSPGGAQD---SSQTESGQSSQMPLLVAP-MPVGTGPPHSHPPPPHPRLYVEGFPPPHHVP 153
            |....|.||...   |...:..:|...|:.:.| .|:|.|          ...:|...|.....|
Human     7 YVSCSSSGGVGGDVLSLAPKFCRSDARPVALQPAFPLGNG----------DGAFVSCLPLAAARP 61

  Fly   154 HPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATTTLLPPAQSQPK 218
            .|                  :||..|:..:.|||.:||                           
Human    62 SP------------------SPPAAPARPSVPPPAAPQ--------------------------- 81

  Fly   219 KSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYARDQAELNHAFVTASNAAAAAQAAASAAGGIS 283
                                            ||  |..|..|:  ...||.||.|..:..|.:.
Human    82 --------------------------------YA--QCTLEGAY--EPGAAPAAAAGGADYGFLG 110

  Fly   284 EQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMRMSDFH 348
            ...|         ||.|...|.:..:..:..|.::..:..|        |.      |..:|...
Human   111 SGPA---------YDFPGVLGRAADDGGSHVHYATSAVFSG--------GG------SFLLSGQV 152

  Fly   349 D--EFKKPIPPHSPIRPQDFP----LYAGGHP--YQLLAQGGSAFHRPLDP-SGKPIPIPMGHNF 404
            |  .|.:|.|         ||    ..|.|||  :|..:.....:.:.:.| ||.|...      
Human   153 DYAAFGEPGP---------FPACLKASADGHPGAFQTASPAPGTYPKSVSPASGLPAAF------ 202

  Fly   405 MPSQLQFEFLARAGMLHHRIPEL-AAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPK 468
              |..::..:.|......::.|. ||.|..||       ||.|:::||.||||:|..||||:|.:
Human   203 --STFEWMKVKRNASKKGKLAEYGAASPSSAI-------RTNFSTKQLTELEKEFHFNKYLTRAR 258

  Fly   469 RFEVASGLMLSETQVKIWFQNRRMKWKRSKK 499
            |.|:|:.|.|::|||||||||||||.|:.::
Human   259 RIEIANCLHLNDTQVKIWFQNRRMKQKKRER 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 33/52 (63%)
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 0/4 (0%)
Homeobox 233..285 CDD:278475 33/51 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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