DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and hoxb3a

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_571192.2 Gene:hoxb3a / 30339 ZFINID:ZDB-GENE-990415-104 Length:417 Species:Danio rerio


Alignment Length:332 Identity:78/332 - (23%)
Similarity:117/332 - (35%) Gaps:136/332 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 SPQPAANHLSH-------SGATMATTTLLPPAQSQPKKS-----FCIDALLAKSQH---QSGEPQ 238
            :|.||..:.:|       |..::.:.....|.|.|..|:     .|:...|....|   |...||
Zfish    28 APAPAFQNSAHLEGDYQRSACSLQSLGTSAPPQPQHAKTKELNGSCMRPSLPPEHHPPPQVSPPQ 92

  Fly   239 PIIVDDRLAALHYARDQAELNHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYDSPSPD 303
                                |...|.|:|  |..|...|..||::                 ...
Zfish    93 --------------------NTVNVAATN--ATQQPGGSGGGGVA-----------------GSG 118

  Fly   304 GMSRSESPTSSHRSSPPIS----PGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQ 364
            |.|:|.|.:||..::|.::    |..::.:|                 :.:.|...|..|....:
Zfish   119 GTSKSSSKSSSMATNPTLTKQIFPWMKESRQ-----------------NTKQKNSSPSASSANAE 166

  Fly   365 DFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPMGHNFMPSQLQFEFLARAGMLHHRIPELAA 429
                          :.||..     .|.|.                                   
Zfish   167 --------------SSGGEK-----SPPGS----------------------------------- 177

  Fly   430 YPHHAILGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKW 494
                   ..::|.|||:||.||:||||:|..|:||.||:|.|:|:.|.|||.|:||||||||||:
Zfish   178 -------AASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKY 235

  Fly   495 KRSKKAQ 501
            |:.:|::
Zfish   236 KKDQKSK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 36/55 (65%)
hoxb3aNP_571192.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..135 25/122 (20%)
Antp-type hexapeptide 140..145 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..184 9/114 (8%)
Homeodomain 181..237 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..290 1/6 (17%)
DUF4074 353..415 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..417
Blue background indicates that the domain is not in the aligned region.

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