DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and hoxb1a

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_571190.2 Gene:hoxb1a / 30337 ZFINID:ZDB-GENE-990415-101 Length:316 Species:Danio rerio


Alignment Length:377 Identity:89/377 - (23%)
Similarity:136/377 - (36%) Gaps:134/377 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 SPQPAANHLS-------HSG----ATMATTTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIV 242
            ||:...:||.       |:|    :..|...|.....:||..:      .|:.|||:|       
Zfish    23 SPKAGYHHLDQAFPGPFHTGHASDSYNADGRLYVGGSNQPPTA------AAQHQHQNG------- 74

  Fly   243 DDRLAALHYARDQAELNHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYD---SPSPDG 304
               :.|.|..::|..:...:......:...||.|::              |..::.   :|..||
Zfish    75 ---IYAHHQHQNQTGMGLTYGGTGTTSYGTQACANS--------------DYAQHQYFINPEQDG 122

  Fly   305 MSRSESPTSSHRSSP----------------PISP----GCEDQQQPHGALHPQHLSMRMSDFHD 349
            |....|..|:..:||                |.:|    |||.|.....                
Zfish   123 MYYHSSGFSTSNASPHYGSMAGAYCGAQGAVPAAPYQHHGCEGQDHQRA---------------- 171

  Fly   350 EFKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPMGHNFMPSQLQFEFL 414
                               |:.|....|.|..|:.......|.||               .|:::
Zfish   172 -------------------YSQGTYADLSASQGTEKDTDQPPPGK---------------TFDWM 202

  Fly   415 ------ARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVA 473
                  .:.|    ::.|....|.:.|       ||.||::||.||||:|..:|||:|.:|.|:|
Zfish   203 KVKRNPPKTG----KVAEYGLGPQNTI-------RTNFTTKQLTELEKEFHFSKYLTRARRVEIA 256

  Fly   474 SGLMLSETQVKIWFQNRRMKWKRSKKAQQEAKERAKANQQQQQQQQTPSAAS 525
            :.|.|:||||||||||||||   .||.::|....|.:...:..:.|:..:.|
Zfish   257 ATLELNETQVKIWFQNRRMK---QKKREKEGLAPASSTSSKDLEDQSDHSTS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 34/52 (65%)
hoxb1aNP_571190.2 Homeobox 226..278 CDD:278475 34/54 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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