DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exex and gbx2

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:478 Identity:111/478 - (23%)
Similarity:146/478 - (30%) Gaps:216/478 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PLLVAPMPVGT-----------GPPHSHP-------------------PPPHPRLYVEGFPPPHH 151
            |.::...|||:           |||...|                   |||.|       |||..
Zfish     8 PFMMMQRPVGSTTAFSIDSLIGGPPQPSPGHFVYTGYPMFMPYRSVVLPPPPP-------PPPPT 65

  Fly   152 VP-------HPHPALGTYPLPRLP----------------LMLPANPPGVPSGAAAPPPVSPQPA 193
            :|       |||     :|:|.||                ||..     :|.|.::.|....|.|
Zfish    66 LPQSALPTTHPH-----HPIPGLPSSFCSSLAQGMALTSTLMAT-----LPGGFSSSPSQQHQDA 120

  Fly   194 ANHLSHSGATMATTTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYARDQAEL 258
            |..|.              :||       |.|:..|||           |.||        ..|.
Zfish   121 ARKLG--------------SQS-------IHAMFDKSQ-----------DIRL--------DGED 145

  Fly   259 NHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPTSS-HRSSPPIS 322
            ...|.|                  .:..::....||:...:.:..|.|:.:|.... ||.....|
Zfish   146 GKTFAT------------------KDSTSIPSFHDSQSVHTSTVRGHSKDDSKEDDCHRKDESFS 192

  Fly   323 PGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHR 387
            ...:                  .|:..:...|                           |:|..:
Zfish   193 MDSD------------------LDYSSDDNGP---------------------------GNAMCQ 212

  Fly   388 PLDPSGKPIPIPMGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLL 452
            ..|..|                       :|.|...:.......:....||.||.||||||:|||
Zfish   213 KEDGDG-----------------------SGGLDDGVHGGNGAGNTTSTGKNRRRRTAFTSEQLL 254

  Fly   453 ELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQQEAK------------ 505
            ||||:|...||||..:|.::|..|.|||.||||||||||.||||.|.....:|            
Zfish   255 ELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNVNSKTGEPSRNPKIVV 319

  Fly   506 -------ERAKANQQQQQQQQTP 521
                   ..|..:|.||.:|..|
Zfish   320 PIPVHVSRFAIRSQHQQLEQARP 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 35/52 (67%)
gbx2NP_694496.1 Homeobox 244..297 CDD:278475 35/52 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.