Protein Alignment exex and Hoxc8

DIOPT Version :10

• Sequence 1: NP_648164.1
• Gene: exex / 38884
• FlyBaseID: FBgn0041156
• Length: 525
• Species: Drosophila melanogaster
• Sequence 2: NP_001170797.2
• Gene: Hoxc8 / 24460
• RGDID: 2821
• Length: 242
• Species: Rattus norvegicus
• Alignment Length: 128
• Identity: 47/128 - (36%)
• Similarity: 68/128 - (53%)
• Gaps: 28/128 - (21%)

  Fly   401 GH---NFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNK 462
            ||   |..|| |.|.::.               ||..  |: |..|..::..|.|||||:|..|.
  Rat   127 GHLNQNSSPS-LMFPWMR---------------PHAP--GR-RSGRQTYSRYQTLELEKEFLFNP 172

  Fly   463 YLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKK------AQQEAKERAKANQQQQQQQQ 519
            ||:|.:|.||:..|.|:|.||||||||||||||:...      |:.|.|...:.|::::::::
  Rat   173 YLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEE 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
exex	NP_648164.1	Homeodomain	440..496	CDD:459649	32/55 (58%)
Hoxc8	NP_001170797.2	Homeodomain	150..206	CDD:459649	32/55 (58%)