DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and Pdx1

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_032840.1 Gene:Pdx1 / 18609 MGIID:102851 Length:284 Species:Mus musculus


Alignment Length:266 Identity:83/266 - (31%)
Similarity:112/266 - (42%) Gaps:78/266 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 SEQE---ALQRIRDSREYD-SPSPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMR 343
            ||::   |.|..:|...:. .|.|:..:...:.....|..||..|             ||..|..
Mouse     3 SEEQYYAATQLYKDPCAFQRGPVPEFSANPPACLYMGRQPPPPPP-------------PQFTSSL 54

  Fly   344 MSDFHDEFKKPIPPHSPIRPQDFPLYAGGHP------YQLLAQGGSAFHRPLDPSGKPIPIPMGH 402
            .|     .::..||  .|.|.:.|..|...|      :.|.||.|.| |.|      |.|.|.|.
Mouse    55 GS-----LEQGSPP--DISPYEVPPLASDDPAGAHLHHHLPAQLGLA-HPP------PGPFPNGT 105

  Fly   403 N----FMPSQLQFEFLARAGMLHHRIPELAAYPHHAILG------------KTRRPRTAFTSQQL 451
            .    ..|:::|..|           |.:.:...||..|            :.:|.|||:|..||
Mouse   106 EPGGLEEPNRVQLPF-----------PWMKSTKAHAWKGQWAGGAYTAEPEENKRTRTAYTRAQL 159

  Fly   452 LELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQQEAKERAKANQQQQQ 516
            |||||:|..|||:|||:|.|:|..|.|:|..:||||||||||||:     :|.|:|:..      
Mouse   160 LELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK-----EEDKKRSSG------ 213

  Fly   517 QQQTPS 522
               |||
Mouse   214 ---TPS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 36/55 (65%)
Pdx1NP_032840.1 Transactivation domain. /evidence=ECO:0000250 13..73 16/79 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..116 27/112 (24%)
Antp-type hexapeptide 119..124 2/15 (13%)
Homeodomain 148..204 CDD:459649 36/55 (65%)
Nuclear localization signal 198..204 5/5 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..284 8/29 (28%)

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