DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and Hoxb4

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_034589.3 Gene:Hoxb4 / 15412 MGIID:96185 Length:250 Species:Mus musculus


Alignment Length:462 Identity:106/462 - (22%)
Similarity:129/462 - (27%) Gaps:270/462 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PPAQDYDQGSNQSTLSPRSQITPSPPAASPTHSAATTGSPVSTYTPALSPGGAQDSS--QTESGQ 112
            ||.::|.|          |...|                  |.::|....||.:..|  |.|:..
Mouse    18 PPCEEYSQ----------SDYLP------------------SDHSPGYYAGGQRRESGFQPEAAF 54

  Fly   113 SSQMPLLVAPMPV--GTGPPHSHPPPPHPRLYVEGFPPPHHVPHPHPALGTYPLPRLPLMLPANP 175
            ..:.|..|.....  ..|||   ||||         |||   |.|.|.|.    ||.|:      
Mouse    55 GRRAPCTVQRYAACRDPGPP---PPPP---------PPP---PPPPPGLS----PRAPV------ 94

  Fly   176 PGVPSGAAAPPPVSPQPAANHLSHSGATMATTTLLP-PAQSQPKKSFCIDALLAKSQHQSGEPQP 239
                           ||.|      ||      ||| |.|                         
Mouse    95 ---------------QPTA------GA------LLPEPGQ------------------------- 107

  Fly   240 IIVDDRLAALHYARDQAELNHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYDSPSPDG 304
                                                                             
Mouse   108 ----------------------------------------------------------------- 107

  Fly   305 MSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPI------PPH-SPIR 362
              |||:.:    |||| .|.|  .|.|   |||       |..|...|:|:      ..| |.:.
Mouse   108 --RSEAVS----SSPP-PPPC--AQNP---LHP-------SPSHSACKEPVVYPWMRKVHVSTVN 153

  Fly   363 PQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPMGHNFMPSQLQFEFLARAGMLHHRIPEL 427
            |.    ||||.|                                                     
Mouse   154 PN----YAGGEP----------------------------------------------------- 161

  Fly   428 AAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRM 492
                        :|.|||:|.||:|||||:|..|:||:|.:|.|:|..|.|||.|:|||||||||
Mouse   162 ------------KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRM 214

  Fly   493 KWKRSKK 499
            |||:..|
Mouse   215 KWKKDHK 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 36/55 (65%)
Hoxb4NP_034589.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..133 57/303 (19%)
Antp-type hexapeptide 140..145 0/4 (0%)
Homeodomain 162..218 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..250 1/3 (33%)

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